ggKbase home page

13_1_40cm_3_scaffold_1470

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1470_1
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

2..502
DNA (501bp) protein (167aa)
phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Acidobacteria_68_9_curated
Phosphoribosylformylglycinamidine synthase 1 n=13 Tax=Lactobacillus rhamnosus RepID=C7TDL2_LACRG
purQ; phosphoribosylformylglycinamidine synthase I
13_1_40cm_3_scaffold_1470_2
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

444..1061
DNA (618bp) protein (206aa)
Tax=RBG_16_Acidobacteria_68_9_curated
13_1_40cm_3_scaffold_1470_3
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

1048..1353
DNA (306bp) protein (102aa)
hypothetical protein; K09981 hypothetical protein Tax=RBG_16_Acidobacteria_68_9_curated
Conserved uncharacterized protein id=2719286 bin=GWC2_Nitrospirae_57_13 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
13_1_40cm_3_scaffold_1470_4
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

1350..3590
DNA (2241bp) protein (747aa)
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Acidobacteria_68_9_curated
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V4_GEMAT
Phosphoribosylformylglycinamidine synthase 2
13_1_40cm_3_scaffold_1470_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3598..5004
DNA (1407bp) protein (469aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Amidophosphoribosyltransferase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E710_GEOLS id=5224143 bin=16ft_combo_ws3_JS1 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
amidophosphoribosyltransferase
13_1_40cm_3_scaffold_1470_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5023..7731
DNA (2709bp) protein (903aa)
pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1U0_SPHTD
13_1_40cm_3_scaffold_1470_7
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7732..8442)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Desmospora sp. 8437 RepID=F5SEM1_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGK12485.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
13_1_40cm_3_scaffold_1470_8
unknown

Not on your lists

8552..9439
DNA (888bp) protein (296aa)

This feature has no annotations

13_1_40cm_3_scaffold_1470_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9463..10173
DNA (711bp) protein (237aa)
Putative Transcriptional regulator, AfsR/DnrI/RedD family n=1 Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1CWF9_DEIDV
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG90388.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1470_10
unknown

Not on your lists

comp(10252..10644)
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_40cm_3_scaffold_1470_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11167..12561)
DNA (1395bp) protein (465aa)
Diguanylate cyclase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FC47_CONWI
diguanylate cyclase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
diguanylate cyclase
13_1_40cm_3_scaffold_1470_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12662..13327)
DNA (666bp) protein (222aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GKT7_9FIRM
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; K06898 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate carboxylase
13_1_40cm_3_scaffold_1470_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13324..14310)
DNA (987bp) protein (329aa)
tRNA-dihydrouridine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V7_GEMAT rbh
putative tRNA-dihydrouridine synthase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
TIM-barrel protein, nifR3 family
13_1_40cm_3_scaffold_1470_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14373..14825
DNA (453bp) protein (151aa)
Phosphotransferase system enzyme IIA component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V8_GEMAT
fruA; phosphotransferase system enzyme IIA component
Phosphotransferase system enzyme IIA component {ECO:0000313|EMBL:BAH38783.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimona
13_1_40cm_3_scaffold_1470_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14822..16291)
DNA (1470bp) protein (490aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE56_CHLTF
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_1470_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16282..17835)
DNA (1554bp) protein (518aa)
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=GUAA_GEMAT
13_1_40cm_3_scaffold_1470_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(17832..19115)
DNA (1284bp) protein (428aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
lysA; diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] id=14627103 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
diaminopimelate decarboxylase
Displaying 17 items

View Taxonomy