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13_1_40cm_3_scaffold_2366

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2366_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..374)
DNA (372bp) protein (124aa)
CMP/dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=RBG_16_Gemmatimonadetes_66_8_curated
dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12]
Cd allosteric enzyme id=3383322 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=Caudovirales taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
13_1_40cm_3_scaffold_2366_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(361..939)
DNA (579bp) protein (193aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Ribonuclease HI n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K0_GEMAT
ribonuclease H
13_1_40cm_3_scaffold_2366_3
Roseivivax halodurans, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(936..1682)
DNA (747bp) protein (249aa)
Universal stress protein family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JF01_9BACT
UspA-related protein nucleotide-binding protein
Universal stress protein UspA {ECO:0000313|EMBL:ETX13728.1}; TaxID=1449350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax h
13_1_40cm_3_scaffold_2366_4
unknown

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comp(1687..1947)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_3_scaffold_2366_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1944..2900)
DNA (957bp) protein (319aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] id=14632058 bin=bin9_gal15 species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
selenide, water dikinase
13_1_40cm_3_scaffold_2366_6
unknown

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comp(3008..3343)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_3_scaffold_2366_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3344..5041)
DNA (1698bp) protein (566aa)
N-acyl-D-aspartate/D-glutamate deacylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NL20_9GAMM
N-acyl-D-aspartate/D-glutamate deacylase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
N-acyl-D-aspartate/D-glutamate deacylase
13_1_40cm_3_scaffold_2366_8
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(5032..6399)
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Nocardiopsis ganjiahuensis RepID=UPI0003480FF8
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
amidohydrolase
13_1_40cm_3_scaffold_2366_9
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6396..6848)
DNA (453bp) protein (151aa)
L-asparaginase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3F64
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII53960.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
13_1_40cm_3_scaffold_2366_10
unknown

Not on your lists

comp(6921..7175)
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_3_scaffold_2366_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7350..9626
DNA (2277bp) protein (759aa)
WD40-like Beta Propeller n=1 Tax=Bacillus cereus R309803 RepID=C2Q875_BACCE
WD40 domain-containing protein; K03641 TolB protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
translocation protein TolB
13_1_40cm_3_scaffold_2366_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9646..10692
DNA (1047bp) protein (349aa)
putative oxidoreductase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Alcohol dehydrogenase zinc-binding domain protein
alcohol dehydrogenase zinc-binding domain protein id=14624585 bin=bin5_DeltaP species=Haladaptatus paucihalophilus genus=Haladaptatus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin5_DeltaP organism_group=Deltaproteobacteria
13_1_40cm_3_scaffold_2366_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


10815..12119
DNA (1305bp) protein (435aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
DNA gyrase subunit A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L6_GEMAT
DNA gyrase subunit A
13_1_40cm_3_scaffold_2366_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

12116..13285
DNA (1170bp) protein (390aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
DNA gyrase subunit A
DNA gyrase subunit A id=1249836 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_40cm_3_scaffold_2366_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13287..14222
DNA (936bp) protein (312aa)
serine/threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPW5_KORVE
pyridoxal-5'-phosphate-dependent protein subunit beta
13_1_40cm_3_scaffold_2366_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14222..15658
DNA (1437bp) protein (479aa)
Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L7_GEMAT
putative two-component response regulator; K02488 two-component system, cell cycle response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
diguanylate cyclase
13_1_40cm_3_scaffold_2366_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15655..16746
DNA (1092bp) protein (364aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKW5_SORC5
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_2366_18
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

16743..18050
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036151AA
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AGY60175.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
13_1_40cm_3_scaffold_2366_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

18047..19138
DNA (1092bp) protein (364aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD8_CHLTF
13_1_40cm_3_scaffold_2366_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

19113..20726
DNA (1614bp) protein (538aa)
Putative M1 family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4U6_GEMAT
putative M1 family peptidase Tax=GWC2_Gemmatimonadetes_71_10_curated
putative M1 family peptidase
13_1_40cm_3_scaffold_2366_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20730..21050
DNA (321bp) protein (107aa)
putative L-sorbosone dehydrogenase (EC:1.1.1.-)
Putative L-sorbosone dehydrogenase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8G0_UNCMA
L-sorbosone dehydrogenase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying 21 items

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