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13_1_40cm_3_scaffold_25432

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_25432_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3..620)
DNA (618bp) protein (206aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJT RepID=UPI0003706694
Ribosomal RNA small subunit methyltransferase A
13_1_40cm_3_scaffold_25432_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(617..2191)
DNA (1575bp) protein (525aa)
Putative phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A0_GEMAT
putative phosphatase Tax=GWC2_Gemmatimonadetes_71_10_curated
protein phosphatase 2C domain protein
13_1_40cm_3_scaffold_25432_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2188..2616)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D4988B
response regulator receiver protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
response regulator receiver protein
13_1_40cm_3_scaffold_25432_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2613..2948)
DNA (336bp) protein (112aa)
Anti-sigma factor antagonist n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A2_GEMAT
putative anti sigma factor antagonist Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
anti-anti-sigma factor
13_1_40cm_3_scaffold_25432_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3009..3818)
DNA (810bp) protein (270aa)
pta; phosphate acetyltransferase (EC:2.3.1.8); K00625 phosphate acetyltransferase [EC:2.3.1.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phosphotransacetylase (EC:2.3.1.8)
Phosphotransacetylase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A44_SOLUE
13_1_40cm_3_scaffold_25432_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3815..4294)
DNA (480bp) protein (160aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A4_GEMAT
13_1_40cm_3_scaffold_25432_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4291..4854)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A5_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_25432_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4832..6340)
DNA (1509bp) protein (503aa)
recJ; single-stranded-DNA-specific exonuclease (EC:3.1.-.-); K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
recJ; single-stranded-DNA-specific exonuclease (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A6_GEMAT
13_1_40cm_3_scaffold_25432_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6488..8821)
DNA (2334bp) protein (778aa)
dnaG; DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
dnaG; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A8_GEMAT
13_1_40cm_3_scaffold_25432_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8818..10722)
DNA (1905bp) protein (635aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=861299 species="Bacteria; Gemma
Endonuclease MutS2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=MUTS2_GEMAT
MutS2 protein
13_1_40cm_3_scaffold_25432_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11001..11417)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4B0_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91001.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_25432_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11457..11594)
DNA (138bp) protein (46aa)
30S ribosomal protein S21 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS21_GEMAT
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 Tax=GWC2_Gemmatimonadetes_71_10_curated
rpsU; 30S ribosomal protein S21
13_1_40cm_3_scaffold_25432_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11676..12014)
DNA (339bp) protein (113aa)
Histidine triad (HIT) protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GPJ6_THISH
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
histidine triad (HIT) protein
13_1_40cm_3_scaffold_25432_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12011..13168)
DNA (1158bp) protein (386aa)
Chaperone protein DnaJ n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4B5_GEMAT
dnaJ; chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=GWC2_Gemmatimonadetes_71_10_curated
Chaperone protein dnaJ
13_1_40cm_3_scaffold_25432_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13170..14213)
DNA (1044bp) protein (348aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4B6_GEMAT
hrcA; heat-inducible transcription repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gem
13_1_40cm_3_scaffold_25432_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14210..14806)
DNA (597bp) protein (199aa)
hemZ; oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=GWC2_Gemmatimonadetes_71_10_curated
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4B7_GEMAT
oxygen-independent coproporphyrinogen III oxidase
13_1_40cm_3_scaffold_25432_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15363..16469)
DNA (1107bp) protein (369aa)
DNA protecting protein DprA n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKF5_RHOM4
DNA protecting protein DprA
DNA protecting protein DprA {ECO:0000313|EMBL:ACY48867.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
13_1_40cm_3_scaffold_25432_18
unknown

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comp(16448..16606)
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying 18 items

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