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13_1_40cm_3_scaffold_2851

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2851_1
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..335)
DNA (333bp) protein (111aa)
Beta-lactamase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YKQ5_9EURY
Beta-lactamase {ECO:0000313|EMBL:ELY74775.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
Zn-dependent hydrolase, glyoxylase
13_1_40cm_3_scaffold_2851_2
unknown

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comp(423..1532)
DNA (1110bp) protein (370aa)

This feature has no annotations

13_1_40cm_3_scaffold_2851_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1747..2220
DNA (474bp) protein (158aa)
Blue-copper protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M3_GEMAT
blue (type 1) copper domain protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:AHG88813.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_2851_4
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2909..4324
DNA (1416bp) protein (472aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
hypothetical protein id=14425243 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
type I phosphodiesterase/nucleotide pyrophosphatase
13_1_40cm_3_scaffold_2851_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4336..5427
DNA (1092bp) protein (364aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_2851_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5424..6335)
DNA (912bp) protein (304aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
Putative uncharacterized protein id=3760564 bin=GWC2_Bacteroidetes_40_13 species=Prevotella maculosa genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
13_1_40cm_3_scaffold_2851_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6326..7306)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ES96_SORC5
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_2851_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7303..8187)
DNA (885bp) protein (295aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Uncharacterized protein id=4674739 bin=GWA2_Ignavibacteriae_55_25 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
hypothetical protein
13_1_40cm_3_scaffold_2851_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8189..9574)
DNA (1386bp) protein (462aa)
glycine C-acetyltransferase (EC:2.3.1.29) Tax=GWC2_Gemmatimonadetes_71_10_curated
Glycine C-acetyltransferase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WSD8_GEOS8
aminotransferase class I and II
13_1_40cm_3_scaffold_2851_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

9695..12256
DNA (2562bp) protein (854aa)
secreted metalloprotease Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative protease id=4116398 bin=GWC2_Planctomycete_KSU_39_26 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
M6 family metalloprotease domain-containing protein
13_1_40cm_3_scaffold_2851_11
unknown

Not on your lists

12253..12654
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_3_scaffold_2851_12
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12651..13013)
DNA (363bp) protein (121aa)
molybdenum transporter n=1 Tax=Ideonella sp. B508-1 RepID=UPI000348652B
Uncharacterized protein {ECO:0000313|EMBL:KDB50904.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans D
ModE family transcriptional regulator
13_1_40cm_3_scaffold_2851_13
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13026..13850)
DNA (825bp) protein (275aa)
ABC-type tungstate transport system permease component-like protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PS79_KRIFD
tungstate ABC transporter permease-like protein
ABC-type tungstate transport system permease component-like protein {ECO:0000313|EMBL:ADB31203.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidace
13_1_40cm_3_scaffold_2851_trna_1
unknown

Not on your lists

14009..14081
DNA (73bp)
transferRNA
13_1_40cm_3_scaffold_2851_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14128..14727
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A825_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38385.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_3_scaffold_2851_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14709..15251
DNA (543bp) protein (181aa)
Putative metal-dependent hydrolase DR_0841 n=1 Tax=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) RepID=Y841_DEIRA
DinB superfamily {ECO:0000313|EMBL:CDM66153.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
DinB-like domain protein
13_1_40cm_3_scaffold_2851_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15251..15496
DNA (246bp) protein (82aa)
hypothetical protein n=2 Tax=Xanthomonas RepID=UPI00034942B3
Cysteine-rich CPXCG protein
Cysteine-rich CPXCG protein {ECO:0000313|EMBL:AHG91532.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_2851_17
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15509..15958
DNA (450bp) protein (150aa)
Response regulator receiver domain protein (CheY-like) n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IGA3_ANADE
response regulator receiver domain-containing protein
Response regulator receiver domain protein (CheY-like) {ECO:0000313|EMBL:ABC83610.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobac
13_1_40cm_3_scaffold_2851_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15953..16591)
DNA (639bp) protein (213aa)
sodA; Superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
superoxide dismutase n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003614830
sodA; Superoxide dismutase
13_1_40cm_3_scaffold_2851_19
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16701..17396
DNA (696bp) protein (232aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein SclubSA_04243 id=2073410 bin=GWD2_Deltaproteobacteria_55_8 species=SAR324 cluster bacterium SCGC AAA001-C10 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_3_scaffold_2851_20
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17401..17970)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain 1710b) RepID=Q3JUT4_BURP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA48922.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source
13_1_40cm_3_scaffold_2851_21
unknown

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comp(18762..19748)
DNA (987bp) protein (329aa)

This feature has no annotations

13_1_40cm_3_scaffold_2851_22
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20005..20256
DNA (252bp) protein (84aa)
ABC-type sugar transport integral membrane protein {ECO:0000313|EMBL:AEF36086.1}; TaxID=875328 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobact
13_1_40cm_3_scaffold_2851_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

20249..21052
DNA (804bp) protein (268aa)
binding-protein-dependent transporters inner membrane component; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC-type sugar transport system, permease component id=4214566 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
sugar ABC transporter permease
13_1_40cm_3_scaffold_2851_24
unknown

Not on your lists

21184..21780
DNA (597bp) protein (199aa)

This feature has no annotations

13_1_40cm_3_scaffold_2851_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

21793..23304
DNA (1512bp) protein (504aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A980_GEMAT
two-component histidine kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
PAS sensor protein
13_1_40cm_3_scaffold_2851_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

23301..24008
DNA (708bp) protein (236aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A978_GEMAT
OmpR family two-component response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curate
transcriptional regulator domain-containing protein
13_1_40cm_3_scaffold_2851_27
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

24010..25467
DNA (1458bp) protein (486aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A977_GEMAT rbh
two-component histidine kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
ATP-binding region ATPase domain protein
13_1_40cm_3_scaffold_2851_28
unknown

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25565..26047
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_40cm_3_scaffold_2851_29
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

26052..26675
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABH1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39848.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
Displaying items 1-30 of 36 in total

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