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13_1_40cm_3_scaffold_3012

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3012_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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15..1229
DNA (1215bp) protein (405aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5F8_GEMAT
multidrug resistance protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
multidrug resistance protein
13_1_40cm_3_scaffold_3012_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1250..2845
DNA (1596bp) protein (532aa)
Putative phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P3_GEMAT
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:AHG89637.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_3012_3
unknown

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2848..3240
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_40cm_3_scaffold_3012_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3525..4169
DNA (645bp) protein (215aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G391_SORC5 id=5224877 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter ATPase Tax=RBG_16_Gemmatimonadetes_66_8_curated
ABC transporter ATPase
13_1_40cm_3_scaffold_3012_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4166..5149
DNA (984bp) protein (328aa)
Putative integral membrane transport protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G387_SORC5 id=5224878 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
integral membrane transport protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_3012_6
RBG_13_Chloroflexi_46_9_curated, Chloroflexi, Bacteria

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comp(5152..5550)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5ST52_9BACT
blue (type 1) copper domain protein Tax=RBG_13_Chloroflexi_46_9_curated
blue (type1) copper domain-containing protein
13_1_40cm_3_scaffold_3012_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5567..7300)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I3_GEMAT
putative protein kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative protein kinase
13_1_40cm_3_scaffold_3012_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(7616..8665)
DNA (1050bp) protein (350aa)
Putative hydrolase n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DD75_MYXXD
Predicted membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:CDM65558.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methyla
Protein of unknown function DUF457, transmembrane
13_1_40cm_3_scaffold_3012_9
unknown

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comp(8970..9242)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_3_scaffold_3012_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9598..10095
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A754_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38064.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_3_scaffold_3012_11
unknown

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10186..10647
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_40cm_3_scaffold_3012_12

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10644..11501
DNA (858bp) protein (286aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR2_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY89250.1}; TaxID=333371 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC-L1N9.;"
hypothetical protein
13_1_40cm_3_scaffold_3012_13
unknown

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11513..12010
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_40cm_3_scaffold_3012_14
unknown

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12014..12361
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_3_scaffold_3012_15

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12325..12879
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR1_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY89251.1}; TaxID=333371 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC-L1N9.;"
Displaying 15 items

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