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13_1_40cm_3_scaffold_322

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_322_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..126)
DNA (126bp) protein (42aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG93422.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_322_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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345..2606
DNA (2262bp) protein (754aa)
peptidase S9B dipeptidylpeptidase IV domain-containing protein; K01278 dipeptidyl-peptidase 4 [EC:3.4.14.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Dipeptidyl aminopeptidase id=3529792 bin=GWC2_Ignavibacteria_38_9 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
dipeptidyl aminopeptidase
13_1_40cm_3_scaffold_322_3
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

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2622..3113
DNA (492bp) protein (164aa)
dimethylargininase; K01482 dimethylargininase [EC:3.5.3.18] Tax=GWC2_Chloroflexi_49_37_curated
dimethylargininase (EC:3.5.3.18)
Dimethylargininase id=1953060 bin=GWD2_Chloroflexi_49_16 species=Rhodanobacter spathiphylli genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_3_scaffold_322_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(3069..5168)
DNA (2100bp) protein (700aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQA5_9FIRM
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein Tax=GWC2_Gemmatimonadetes_71_10_curated
methyl-accepting chemotaxis sensory transducer with Cache sensor
13_1_40cm_3_scaffold_322_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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5191..7584
DNA (2394bp) protein (798aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=GWC2_Gemmatimonadetes_71_10_curated
Leucine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q0_GEMAT
leucyl-tRNA synthetase class Ia
13_1_40cm_3_scaffold_322_6
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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comp(7581..8687)
DNA (1107bp) protein (369aa)
hypothetical protein Tax=RBG_16_Acidobacteria_68_9_curated
hypothetical protein id=14428743 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_3_scaffold_322_7
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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8785..9315
DNA (531bp) protein (177aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQC2_PSEUU
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Acidobacteria_68_9_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_3_scaffold_322_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9312..9902
DNA (591bp) protein (197aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_322_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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9921..10895
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003623659
PDZ/DHR/GLGF domain-containing protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Peptidase S1C, Do
13_1_40cm_3_scaffold_322_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(10941..13628)
DNA (2688bp) protein (896aa)
Zinc carboxypeptidase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHA5_CHLTF
Zinc carboxypeptidase {ECO:0000313|EMBL:CDM65730.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Zinc carboxypeptidase
13_1_40cm_3_scaffold_322_11
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(13686..15602)
DNA (1917bp) protein (639aa)
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3)
Signal transduction histidine kinase, nitrogen specific, NtrB {ECO:0000313|EMBL:ABQ91390.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABQ91390.1};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chlo
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXN7_ROSS1
13_1_40cm_3_scaffold_322_12
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15599..16276)
DNA (678bp) protein (226aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q092D2_STIAD
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO69668.1}; Uncharacterized protein {ECO:0000313|EMBL:EAU66613.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcale
13_1_40cm_3_scaffold_322_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16469..17035
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4P8M1_9CAUL
PadR family transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
PadR-like family transcriptional regulator
13_1_40cm_3_scaffold_322_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17045..18016)
DNA (972bp) protein (324aa)
UniRef90_D6U5B8 Molybdopterin dehydrogenase FAD-binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5B8_9CHLR id=1247860 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
13_1_40cm_3_scaffold_322_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18016..18948)
DNA (933bp) protein (311aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein id=14627888 bin=bin7_NC10_sister species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
Displaying 15 items

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