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13_1_40cm_3_scaffold_3865

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3865_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2..736)
DNA (735bp) protein (245aa)
ligB; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003779B64
ligB; ATP-dependent DNA ligase
13_1_40cm_3_scaffold_3865_2
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

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1111..1554
DNA (444bp) protein (148aa)
Phosphohydrolase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LV67_SYNAS
putative NTP pyrophosphohydrolase Tax=RBG_13_Caldithrix_44_9_curated
phosphohydrolase
13_1_40cm_3_scaffold_3865_3
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(1606..2202)
DNA (597bp) protein (199aa)
XRE family transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
XRE family transcriptional regulator id=14628080 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
XRE family transcriptional regulator
13_1_40cm_3_scaffold_3865_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2426..2764
DNA (339bp) protein (113aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein id=14628081 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_3_scaffold_3865_5
unknown

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2784..2993
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_3_scaffold_3865_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3174..3392
DNA (219bp) protein (73aa)
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Translation initiation factor IF-1
translation initiation factor IF-1 id=4225919 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
13_1_40cm_3_scaffold_3865_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3405..3944)
DNA (540bp) protein (180aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF
methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Nevskia ramosa RepID=UPI0003B76409
Methylated-DNA--protein-cysteine methyltransferase
13_1_40cm_3_scaffold_3865_8
unknown

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4001..4438
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_3_scaffold_3865_9

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4560..7367
DNA (2808bp) protein (936aa)
serine/threonine protein kinase id=16959103 bin=RBG_16_Aminicenantes_63_14 tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Uncharacterized protein {ECO:0000313|EMBL:KKM23169.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
serine/threonine protein kinase
13_1_40cm_3_scaffold_3865_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7540..7854
DNA (315bp) protein (105aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein id=14628081 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_3_scaffold_3865_11
unknown

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7941..8141
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_3_scaffold_3865_12
unknown

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comp(8128..8433)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_3_scaffold_3865_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8597..9544
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002D51CD7
hypothetical protein; K13735 adhesin/invasin Tax=RBG_16_Gemmatimonadetes_66_8_curated
Ig domain-containing protein group 1 domain-containing protein
13_1_40cm_3_scaffold_3865_14
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

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10073..10540
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Mycobacterium canettii CIPT 140070017 RepID=L0QRR1_9MYCO
PE-PGRS family protein Tax=CG_Delta_07
PE_PGRS; Conserved protein of unknown function, PE-PGRS family protein PE_PGRS46
13_1_40cm_3_scaffold_3865_15
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

Not on your lists

comp(10711..12744)
DNA (2034bp) protein (678aa)
serine/threonine protein kinase Tax=RBG_16_Zixibacteria_48_11_curated
protein kinase
TPR repeat-containing serine/threonin protein kinase id=24431878 bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_1_40cm_3_scaffold_3865_16
unknown

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12767..13105
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_3_scaffold_3865_trna_1
unknown

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13412..13495
DNA (84bp)
transferRNA
13_1_40cm_3_scaffold_3865_17
Pluralibacter gergoviae, Pluralibacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14002..14277
DNA (276bp) protein (92aa)
isomerase n=1 Tax=Pseudomonas fluorescens RepID=UPI00030470C2
isomerase
Isomerase {ECO:0000313|EMBL:AIR01436.1}; TaxID=61647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pluralibacter.;" source="Pluralibacter gergoviae (En
Displaying 18 items

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