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13_1_40cm_3_scaffold_4148

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_4148_1
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(17..1213)
DNA (1197bp) protein (399aa)
diguanylate cyclase id=14431325 bin=bin3_NC10 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
diguanylate cyclase Tax=CSP1_5_NC10
diguanylate cyclase
13_1_40cm_3_scaffold_4148_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1530..2300)
DNA (771bp) protein (257aa)
diguanylate cyclase Tax=RBG_16_Acidobacteria_70_10_curated
diguanylate cyclase id=7202273 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
diguanylate cyclase
13_1_40cm_3_scaffold_4148_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2376..3251)
DNA (876bp) protein (292aa)
TPR repeat-containing protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I5M5_HALRX
diguanylate cyclase and serine/threonine protein kinase with TPR repeats Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
TPR repeat-containing protein
13_1_40cm_3_scaffold_4148_4
unknown

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3500..4063
DNA (564bp) protein (188aa)

This feature has no annotations

13_1_40cm_3_scaffold_4148_5
unknown

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4108..4344
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_3_scaffold_4148_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(4318..5001)
DNA (684bp) protein (228aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_4148_7
unknown

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5054..5668
DNA (615bp) protein (205aa)

This feature has no annotations

13_1_40cm_3_scaffold_4148_trna_1
unknown

Not on your lists

5659..5731
DNA (73bp)
transferRNA
13_1_40cm_3_scaffold_4148_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5776..6855
DNA (1080bp) protein (360aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_4148_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6857..7426)
DNA (570bp) protein (190aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_4148_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7525..8757
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1V0_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB54131.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sourc
13_1_40cm_3_scaffold_4148_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8771..10009)
DNA (1239bp) protein (413aa)
histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Sensor histidine kinase/response regulator n=1 Tax=Dehalococcoides sp. (strain VS) RepID=D2BJK4_DEHSV
sensor histidine kinase/response regulator
13_1_40cm_3_scaffold_4148_trna_2
unknown

Not on your lists

10127..10208
DNA (82bp)
transferRNA
13_1_40cm_3_scaffold_4148_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10258..10944)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YCK3_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP42130.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_3_scaffold_4148_13
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10937..11203)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I5X4_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KKB85935.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
13_1_40cm_3_scaffold_4148_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11354..11785
DNA (432bp) protein (144aa)
DGPFAETKE family protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HE85_ANADF
DGPFAETKE family protein
Dehydrogenase {ECO:0000313|EMBL:KIO48215.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
13_1_40cm_3_scaffold_4148_15
unknown

Not on your lists

11782..12153
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NFH7_9GAMM
DGPFAETKE family protein {ECO:0000313|EMBL:CPR22040.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp.
hypothetical protein
13_1_40cm_3_scaffold_4148_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12267..13334
DNA (1068bp) protein (356aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKH1_SORC5
ECF subfamily RNA polymerase sigma factor
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:CAN96584.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;
13_1_40cm_3_scaffold_4148_17
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

13331..13747
DNA (417bp) protein (139aa)
DoxX family protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4ULK1_ANASK
DoxX family protein
DoxX; K15977 putative oxidoreductase Tax=RBG_13_Acidobacteria_68_16_curated
13_1_40cm_3_scaffold_4148_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13748..15091
DNA (1344bp) protein (448aa)
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:AHG91656.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
MatE family protein id=12554642 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Displaying 20 items

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