ggKbase home page

13_1_40cm_3_scaffold_573

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_573_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2..1270
DNA (1269bp) protein (423aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93036.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_573_2
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1267..1656
DNA (390bp) protein (130aa)
Glycosyl transferase family 2 n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QX56_ISOPI
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADV60889.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera palli
13_1_40cm_3_scaffold_573_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1743..3161
DNA (1419bp) protein (473aa)
Protoporphyrinogen oxidase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T526_9CYAN
amine oxidase
Amine oxidase {ECO:0000313|EMBL:AHG88416.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_573_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3183..4325
DNA (1143bp) protein (381aa)
Glycosyl transferase family 2 n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R075_ISOPI
Glycosyltransferase, capsule biosynthesis protein
Glycosyltransferase, capsule biosynthesis protein {ECO:0000313|EMBL:AHG88415.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_573_5
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4393..4722
DNA (330bp) protein (110aa)
FAD dependent oxidoreductase n=1 Tax=delta proteobacterium NaphS2 RepID=D8F3R4_9DELT
protoporphyrinogen oxidase Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
13_1_40cm_3_scaffold_573_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4742..5038
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SQ11_9BACT
FAD dependent oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Protoporphyrinogen oxidase
13_1_40cm_3_scaffold_573_7
unknown

Not on your lists

5074..6246
DNA (1173bp) protein (391aa)

This feature has no annotations

13_1_40cm_3_scaffold_573_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6270..8417
DNA (2148bp) protein (716aa)
Putative uncharacterized protein n=1 Tax=Arthrospira sp. PCC 8005 RepID=H1WDL1_9CYAN
TPR domain protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_3_scaffold_573_9
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria

Not on your lists

8481..9476
DNA (996bp) protein (332aa)
UDP-glucose 4-epimerase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NHA8_9BACT rbh
NAD-dependent epimerase/dehydratase Tax=GWF2_Planctomycetes_40_8_curated
NAD-dependent epimerase/dehydratase
13_1_40cm_3_scaffold_573_10
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9484..11694
DNA (2211bp) protein (737aa)
Glycosyl transferase family 2 n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UK07_9CYAN
Glycosyl transferase family 2 {ECO:0000313|EMBL:EGK86113.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;
glycosyl transferase family 2
13_1_40cm_3_scaffold_573_11
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

11691..13112
DNA (1422bp) protein (474aa)
Glycosyl transferase id=4726987 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Microcystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:ERT09835.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;
13_1_40cm_3_scaffold_573_12
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(13141..14763)
DNA (1623bp) protein (541aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Azoarcus sp. KH32C RepID=H0PY75_9RHOO rbh
glucose-methanol-choline oxidoreductase Tax=RBG_16_Zixibacteria_53_22_curated
glucose-methanol-choline oxidoreductase
13_1_40cm_3_scaffold_573_13
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14751..16628)
DNA (1878bp) protein (626aa)
Probable transferase transmembrane protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C6S7_9PLAN
Probable transferase transmembrane protein {ECO:0000313|EMBL:EDL59689.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesi
transferase protein
13_1_40cm_3_scaffold_573_14
unknown

Not on your lists

comp(16672..17253)
DNA (582bp) protein (194aa)

This feature has no annotations

13_1_40cm_3_scaffold_573_15
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17392..19107
DNA (1716bp) protein (572aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN44270.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
Uncharacterized protein id=2574299 bin=GWF1_Xanthomonadales_69_6 species=Thiocystis violascens genus=Thiocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
hypothetical protein
13_1_40cm_3_scaffold_573_16
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

19272..20273
DNA (1002bp) protein (334aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidyltransferase {ECO:0000313|EMBL:ACC82901.1}; EC=2.7.7.24 {ECO:0000313|EMBL:ACC82901.1};; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" sour
Glucose-1-phosphate thymidyltransferase id=2021414 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_3_scaffold_573_17
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20273..21379
DNA (1107bp) protein (369aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desul
dTDP-glucose 4,6-dehydratase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CQK9_DESK7
13_1_40cm_3_scaffold_573_18
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21424..22302
DNA (879bp) protein (293aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AEG14326.1}; EC=1.1.1.133 {ECO:0000313|EMBL:AEG14326.1};; Flags: Precursor;; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; P
dTDP-4-dehydrorhamnose reductase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CQK8_DESK7
13_1_40cm_3_scaffold_573_19
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

22299..22832
DNA (534bp) protein (178aa)
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AGY56695.1}; EC=5.1.3.13 {ECO:0000313|EMBL:AGY56695.1};; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobac
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QG97_9CYAN
13_1_40cm_3_scaffold_573_20
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23014..24609
DNA (1596bp) protein (532aa)
Radical SAM domain protein id=4439710 bin=GWF2_Bacteroidetes_35_48 species=[Clostridium] difficile genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
Radical SAM domain protein Tax=GWF2_Bacteroidetes_35_48_curated
13_1_40cm_3_scaffold_573_21
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

24871..26583
DNA (1713bp) protein (571aa)
Sulfite reductase (NADPH) hemoprotein beta-component n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3T2_CALAS
cysI; sulfite reductase (NADPH) hemoprotein beta-component
Sulfite reductase (NADPH) hemoprotein beta-component {ECO:0000313|EMBL:BAL99919.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldi
13_1_40cm_3_scaffold_573_22
RBG_19FT_COMBO_Deltaproteobacteria_58_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26580..26801
DNA (222bp) protein (74aa)
siroheme synthase; K02304 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4] Tax=RBG_19FT_COMBO_Deltaproteobacteria_58_16_curated
13_1_40cm_3_scaffold_573_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

26798..27310
DNA (513bp) protein (171aa)
Uroporphyrin-III C-methyltransferase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SH74_THEM7
uroporphyrin-III C-methyltransferase
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:AHG88640.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 23 items

View Taxonomy