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13_1_40cm_3_scaffold_559

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_559_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..291)
DNA (291bp) protein (97aa)
Thioredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T2_GEMAT
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_559_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

333..722
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T1_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
methylmalonyl-CoA epimerase
13_1_40cm_3_scaffold_559_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(738..1223)
DNA (486bp) protein (162aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_559_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1265..1993
DNA (729bp) protein (243aa)
pdxJ; pyridoxine 5'-phosphate synthase (EC:2.6.99.2); K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pdxJ; pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S9_GEMAT
13_1_40cm_3_scaffold_559_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1994..3685)
DNA (1692bp) protein (564aa)
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQV1_KORVE
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:AHG92267.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KB
13_1_40cm_3_scaffold_559_6
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

3723..4010
DNA (288bp) protein (96aa)
zinc finger UBP-type protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003763E51
Zn-finger-containing protein Tax=RBG_16_Spirochaete_67_19_curated
hypothetical protein
13_1_40cm_3_scaffold_559_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4022..4339)
DNA (318bp) protein (106aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91743.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_559_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(4336..4902)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U7F3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH79814.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_40cm_3_scaffold_559_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5013..5654)
DNA (642bp) protein (214aa)
LigA n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZR0_RUBXD
LigA
LigA {ECO:0000313|EMBL:ABG03118.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrob
13_1_40cm_3_scaffold_559_10
unknown

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comp(5682..6332)
DNA (651bp) protein (217aa)

This feature has no annotations

13_1_40cm_3_scaffold_559_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(6532..7035)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Anoxybacillus sp. SK3-4 RepID=T0B3F0_9BACI
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_40cm_3_scaffold_559_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7155..7493
DNA (339bp) protein (113aa)
Putative regulatory protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FB58_SORC5
regulatory protein
Putative regulatory protein {ECO:0000313|EMBL:CAN97979.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangiu
13_1_40cm_3_scaffold_559_13
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7573..8631
DNA (1059bp) protein (353aa)
Luciferase family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YC8_SOLUE
putative FMN-dependent luciferase-like monooxygenase family protein
Putative FMN-dependent luciferase-like monooxygenase family protein {ECO:0000313|EMBL:AIC16670.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae
13_1_40cm_3_scaffold_559_14
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8628..9149
DNA (522bp) protein (174aa)
Cyclic nucleotide-binding protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SE40_GEOOG
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ADB74512.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus o
13_1_40cm_3_scaffold_559_15
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(9163..9828)
DNA (666bp) protein (222aa)
Rhomboid family protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EHN5_9CHLR
rhomboid family protein Tax=RBG_13_Chloroflexi_68_17_curated
rhomboid family protein
13_1_40cm_3_scaffold_559_16
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9855..10382)
DNA (528bp) protein (176aa)
methionine sulfoxide reductase A (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46TM4_CUPPJ
13_1_40cm_3_scaffold_559_17
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10547..10927
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RKG2_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EEP70780.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_3_scaffold_559_18
RLO_PLX_64_10, Bacteria

Not on your lists

comp(10896..11174)
DNA (279bp) protein (93aa)
Bll2902 protein n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MC55_9NOCA
putative redox protein, regulator of disulfide bond formation; K06889; K07397 putative redox protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
OsmC-like protein
13_1_40cm_3_scaffold_559_19
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11181..11348)
DNA (168bp) protein (56aa)
OsmC family protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JAD6_OLICO
OsmC family protein; K06889; K07397 putative redox protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
OsmC family protein
13_1_40cm_3_scaffold_559_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11363..12223)
DNA (861bp) protein (287aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XHZ3_9CHRO
glycine betaine ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Substrate-binding region of ABC-type glycine betaine transport system
13_1_40cm_3_scaffold_559_21
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12220..12777)
DNA (558bp) protein (186aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XF78_9CHRO
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AFZ31280.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;"
13_1_40cm_3_scaffold_559_22
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12846..13571)
DNA (726bp) protein (242aa)
Fe(3+)-transporting ATPase {ECO:0000313|EMBL:EGK85622.1}; EC=3.6.3.30 {ECO:0000313|EMBL:EGK85622.1};; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus
Fe(3+)-transporting ATPase (EC:3.6.3.30)
Fe(3+)-transporting ATPase n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UKW7_9CYAN
13_1_40cm_3_scaffold_559_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13610..15244
DNA (1635bp) protein (545aa)
Hpt domain protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_559_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15285..15692
DNA (408bp) protein (136aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S7_GEMAT
hypothetical protein; K07027 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
Displaying 24 items

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