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13_1_40cm_3_scaffold_6070

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_6070_1
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3..806)
DNA (804bp) protein (268aa)
TonB-dependent receptor plug n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIB6_9BACT
TonB-dependent receptor, plug Tax=GWC2_Ignavibacteria_rel_36_12_curated
TonB-dependent receptor, plug
13_1_40cm_3_scaffold_6070_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(934..2856)
DNA (1923bp) protein (641aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM85_KORVE
PAS/PAC sensor hybrid histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
multi-sensor hybrid histidine kinase
13_1_40cm_3_scaffold_6070_3
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(2930..3802)
DNA (873bp) protein (291aa)
hypothetical protein id=7202063 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
drug/metabolite transporter (DMT) superfamily permease
13_1_40cm_3_scaffold_6070_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3799..5979)
DNA (2181bp) protein (727aa)
UvrABC system protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9P0_GEMAT
uvrA; UvrABC system protein A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
excinuclease ABC, A subunit
13_1_40cm_3_scaffold_6070_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5951..6541)
DNA (591bp) protein (197aa)
UvrABC system protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9P0_GEMAT
excinuclease ABC, A subunit
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_6070_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

6573..7655
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y147_SORCE
hypothetical protein; K07027 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_3_scaffold_6070_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

7730..9181
DNA (1452bp) protein (484aa)
ABC transporter, ATP-binding, FHA domain protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0BZY2_ACAM1
FHA domain-containing protein; K02283 pilus assembly protein CpaF Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC transporter ATP-binding protein
13_1_40cm_3_scaffold_6070_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

9258..9974
DNA (717bp) protein (239aa)
putative serine/threonine protein phosphatase (EC:3.1.3.16); K01090 protein phosphatase [EC:3.1.3.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative serine/threonine protein phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9N8_GEMAT
protein phosphatase 2C domain protein
13_1_40cm_3_scaffold_6070_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9977..11194)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9N5_GEMAT
hypothetical protein; K06885 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
metal-dependent phosphohydrolase HD sub domain-containing protein
13_1_40cm_3_scaffold_6070_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11169..11906)
DNA (738bp) protein (246aa)
pckA; phosphoenolpyruvate carboxykinase (EC:4.1.1.49); K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XQM5_9BACT
Phosphoenolpyruvate carboxykinase [ATP]
13_1_40cm_3_scaffold_6070_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11965..12651)
DNA (687bp) protein (229aa)
pckA; phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9N1_GEMAT
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
13_1_40cm_3_scaffold_6070_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12720..14654)
DNA (1935bp) protein (645aa)
malic enzyme (EC:1.1.1.40); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XW7_SOLUE
phosphate acetyl/butaryl transferase
13_1_40cm_3_scaffold_6070_13
unknown

Not on your lists

14863..15261
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_40cm_3_scaffold_6070_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15368..17722
DNA (2355bp) protein (785aa)
Cna protein B-type domain protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9J4_ACIC5
Cna protein B-type domain-containing protein
Outer membrane receptor protein {ECO:0000313|EMBL:CDM64114.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_40cm_3_scaffold_6070_15
unknown

Not on your lists

17930..18802
DNA (873bp) protein (291aa)

This feature has no annotations

13_1_40cm_3_scaffold_6070_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19458..20879)
DNA (1422bp) protein (474aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT04_9BACT
ABC-3 protein; K02075 zinc/manganese transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ABC-3 protein
13_1_40cm_3_scaffold_6070_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(20846..21262)
DNA (417bp) protein (139aa)
troA; periplasmic zinc binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC-type metal ion transporter, periplasmic subunit id=3785326 bin=GWC2_ACD39_50_8 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
periplasmic solute binding protein
13_1_40cm_3_scaffold_6070_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(21264..22442)
DNA (1179bp) protein (393aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT06_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_3_scaffold_6070_19
unknown

Not on your lists

22548..22835
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_3_scaffold_6070_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22796..23662)
DNA (867bp) protein (289aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
Probable endonuclease 4 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M8_GEMAT
endonuclease 4
13_1_40cm_3_scaffold_6070_21
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23659..24294)
DNA (636bp) protein (212aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RBG_16_Desulfobacca_60_12_curated
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Methanoregula boonei (strain 6A8) RepID=PIMT_METB6
13_1_40cm_3_scaffold_6070_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

24470..25756
DNA (1287bp) protein (429aa)
Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L7_GEMAT
putative two-component response regulator; K02488 two-component system, cell cycle response regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
putative two-component response regulator
13_1_40cm_3_scaffold_6070_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25767..27002)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M7_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_6070_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(26999..27832)
DNA (834bp) protein (278aa)
Cell division protein FtsX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M6_GEMAT
ftsX; cell division protein FtsX; K09811 cell division transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ftsX; cell division protein FtsX
13_1_40cm_3_scaffold_6070_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27855..28238
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YY23_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFI72019.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. sui
Displaying 25 items

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