ggKbase home page

13_1_40cm_3_scaffold_873

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_873_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2..937
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00036EFBB4
TPR-repeat-containing protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_873_2
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

1075..2310
DNA (1236bp) protein (412aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
Glutamate dehydrogenase id=4040229 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gdhA; glutamate dehydrogenase
13_1_40cm_3_scaffold_873_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2923..4038)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6C0_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_3_scaffold_873_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(4026..4952)
DNA (927bp) protein (309aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_3_scaffold_873_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4949..6562)
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A3K6_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_873_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6576..7940)
DNA (1365bp) protein (455aa)
Sodium/hydrogen exchanger family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A508_GEMAT
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:AHG89396.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_873_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7977..11453
DNA (3477bp) protein (1159aa)
dnaE; DNA polymerase III alpha subunit (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA polymerase III alpha subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B9_GEMAT
DNA polymerase III, alpha subunit
13_1_40cm_3_scaffold_873_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

11453..12409
DNA (957bp) protein (319aa)
accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ACCA_GEMAT
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
13_1_40cm_3_scaffold_873_9
unknown

Not on your lists

comp(12357..13109)
DNA (753bp) protein (251aa)

This feature has no annotations

13_1_40cm_3_scaffold_873_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


13240..14760
DNA (1521bp) protein (507aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionyl-tRNA synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B6_GEMAT
13_1_40cm_3_scaffold_873_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14850..15791
DNA (942bp) protein (314aa)
Metalloendopeptidase-like protein Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M23 id=7201700 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
yebA2; M23 peptidase domain-containing protein
13_1_40cm_3_scaffold_873_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15840..16688
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002ECC3F2
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_873_13
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16685..17026
DNA (342bp) protein (114aa)
Putative Cupredoxin n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSF8_THIA3
putative Cupredoxin
Putative Cupredoxin {ECO:0000313|EMBL:CAZ87686.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701
13_1_40cm_3_scaffold_873_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17083..18360)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB41_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39447.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_3_scaffold_873_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18375..21425)
DNA (3051bp) protein (1017aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB40_GEMAT rbh
putative outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:BAH39446.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (s
13_1_40cm_3_scaffold_873_16
unknown

Not on your lists

21708..22130
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_40cm_3_scaffold_873_17
unknown

Not on your lists

comp(22073..22186)
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_40cm_3_scaffold_873_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22227..23150)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9E3_GEMAT
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG89757.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_873_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23150..23626)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9E3_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90169.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 19 items

View Taxonomy