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13_1_40cm_3_scaffold_940

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_940_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(1..429)
DNA (429bp) protein (143aa)
citrate (Si)-synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=RBG_16_RIF_WS3X_71_46_curated
citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXM0_9EURY id=5225332 bin=16ft_combo_ws3_JS1 species=Haladaptatus paucihalophilus genus=Haladaptatus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_40cm_3_scaffold_940_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1003..2415)
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000369B1CF
Peptidase M20 {ECO:0000313|EMBL:EYF06850.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apicu
hypothetical protein
13_1_40cm_3_scaffold_940_3
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2382..2705)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DC96_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL08024.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
13_1_40cm_3_scaffold_940_4
RBG_19FT_COMBO_Aminicenantes_59_29_curated, Aminicenantes, Bacteria

Not on your lists

comp(2702..3604)
DNA (903bp) protein (301aa)
hypothetical protein id=8267249 bin=CD_OP8_4m species=Gracilimonas tropica genus=Gracilimonas taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
lipoprotein NlpI, contains TPR repeats Tax=RBG_19FT_COMBO_Aminicenantes_59_29_curated
Tetratricopeptide TPR_2 repeat-containing protein
13_1_40cm_3_scaffold_940_5
unknown

Not on your lists

comp(3632..4105)
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_40cm_3_scaffold_940_6
unknown

Not on your lists

comp(4084..4383)
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_3_scaffold_940_trna_2
unknown

Not on your lists

comp(4389..4475)
DNA (87bp)
transferRNA
13_1_40cm_3_scaffold_940_trna_1
unknown

Not on your lists

comp(4483..4569)
DNA (87bp)
transferRNA
13_1_40cm_3_scaffold_940_7
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4600..6123)
DNA (1524bp) protein (508aa)
Benzoate-CoA ligase family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LVL9_HALO1
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EYF05781.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source
benzoate-CoA ligase family
13_1_40cm_3_scaffold_940_8
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6138..6887
DNA (750bp) protein (250aa)
Creatininase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LVM0_HALO1
creatininase
Creatininase {ECO:0000313|EMBL:ACY17581.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum
13_1_40cm_3_scaffold_940_9
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6874..7638
DNA (765bp) protein (255aa)
Oxidoreductase n=2 Tax=Ralstonia solanacearum RepID=V5AJJ3_RALSL
RSp0033; oxidoreductase
Probable oxidoreductase protein {ECO:0000313|EMBL:CAD17184.1}; TaxID=267608 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sol
13_1_40cm_3_scaffold_940_10
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7646..8026
DNA (381bp) protein (127aa)
Bona fide RidA/YjgF/TdcF/RutC subgroup {ECO:0000313|EMBL:AKF07328.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;"
Endoribonuclease L-PSP id=3925212 bin=GWC2_Syntrophobacterales_56_13 species=unknown genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
endoribonuclease L-PSP
13_1_40cm_3_scaffold_940_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8023..8811
DNA (789bp) protein (263aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FQH6_SORC5
Enoyl-CoA hydratase {ECO:0000313|EMBL:EYF00334.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces
13_1_40cm_3_scaffold_940_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8811..9947
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000379B90F
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KGF82116.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
acyl-CoA dehydrogenase-like protein
13_1_40cm_3_scaffold_940_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9944..12193
DNA (2250bp) protein (750aa)
oxidoreductase (EC:1.-.-.-); K09461 anthraniloyl-CoA monooxygenase [EC:1.14.13.40] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
oxidoreductase (EC:1.-.-.-)
Oxidoreductase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AAA3_9PROT
13_1_40cm_3_scaffold_940_14
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

12190..12972
DNA (783bp) protein (261aa)
Tryptophan 2,3-dioxygenase {ECO:0000255|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000255|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000255|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000255|HAM
Tryptophan 2,3-dioxygenase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=T23O_HERA2
tryptophan 23-dioxygenase
13_1_40cm_3_scaffold_940_15
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12969..14096
DNA (1128bp) protein (376aa)
Kynureninase {ECO:0000313|EMBL:KJS02541.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
Kynureninase id=1734527 bin=GWB2_Desulfobacterales_56_26 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
kynureninase
13_1_40cm_3_scaffold_940_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14047..14508)
DNA (462bp) protein (154aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacter
Putative cytosine deaminase n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VSW0_ARTAR
CMP/dCMP deaminase zinc-binding protein
13_1_40cm_3_scaffold_940_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14501..16849)
DNA (2349bp) protein (783aa)
Chaperone ClpB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8H4_GEMAT
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ATP-dependent chaperone ClpB
13_1_40cm_3_scaffold_940_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17201..17644)
DNA (444bp) protein (148aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ial:IALB_2784 Putative carboxypeptidase id=719741 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
13_1_40cm_3_scaffold_940_19
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17756..19627)
DNA (1872bp) protein (624aa)
selenocysteine-specific protein translation elongation factor; K03833 selenocysteine-specific elongation factor Tax=CG_Syntroph_01
Selenocysteine-specific protein translation Elongation Factor id=4561235 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
selB; selenocysteine-specific translation elongation factor
13_1_40cm_3_scaffold_940_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19606..20385)
DNA (780bp) protein (260aa)
DNA repair protein RecO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8H2_GEMAT
DNA repair protein recO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;"
13_1_40cm_3_scaffold_940_21
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(20382..21182)
DNA (801bp) protein (267aa)
Periplasmic binding protein n=2 Tax=Chloroflexus RepID=A9WHK1_CHLAA
periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ABY36327.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chlorofl
13_1_40cm_3_scaffold_940_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21212..23179)
DNA (1968bp) protein (656aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF9_GEMAT rbh
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_940_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23216..25108)
DNA (1893bp) protein (631aa)
Putative TonB-dependent outer membrane receptor for cobalamin and Fe transport n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHA1_9BACT
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AHG90671.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_940_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25105..25896)
DNA (792bp) protein (264aa)
btuC; putative vitamin B12 transport protein BtuD; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative vitamin B12 transport protein BtuD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5M7_GEMAT
btuC; putative vitamin B12 transport protein BtuD
13_1_40cm_3_scaffold_940_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25940..26881)
DNA (942bp) protein (314aa)
hemin ABC transporter permease n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AD06
transmembrane ABC transporter protein,permease; K02015 iron complex transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
iron ABC transporter
13_1_40cm_3_scaffold_940_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26878..27498)
DNA (621bp) protein (207aa)
ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G9_GEMAT
ABC transporter substrate-binding protein; K02016 iron complex transport system substrate-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC transporter substrate-binding protein
13_1_40cm_3_scaffold_940_27
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(27808..28695)
DNA (888bp) protein (296aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_3_scaffold_940_28
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(28769..29296)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G7_GEMAT
hypothetical protein; K08999 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF151
Displaying items 1-30 of 32 in total

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