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13_1_40cm_3_scaffold_98

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_98_1
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

2..400
DNA (399bp) protein (133aa)
aminotransferase (EC:2.6.1.-); K00837 [EC:2.6.1.-] id=24551193 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
aminotransferase (EC:2.6.1.-); K00837 [EC:2.6.1.-] Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
putative aminotransferase (EC:2.6.1.-)
13_1_40cm_3_scaffold_98_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

417..1766
DNA (1350bp) protein (450aa)
gapD; succinate semialdehyde dehydrogenase (EC:1.2.1.16) Tax=GWC2_Gemmatimonadetes_71_10_curated
gapD; succinate semialdehyde dehydrogenase (EC:1.2.1.16)
Succinate semialdehyde dehydrogenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P812_9BACT
13_1_40cm_3_scaffold_98_3
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1770..2213)
DNA (444bp) protein (148aa)
Low-affinity inorganic phosphate transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB09_GEMAT
pit; low-affinity inorganic phosphate transporter; K03306 inorganic phosphate transporter, PiT family Tax=RBG_16_Actinobacteria_67_10_curated
pit; low-affinity inorganic phosphate transporter
13_1_40cm_3_scaffold_98_4
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

2504..2707
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08QU6_STIAD
Uncharacterized protein Tax=RBG_16_Acidobacteria_68_9_curated
13_1_40cm_3_scaffold_98_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2778..3392)
DNA (615bp) protein (205aa)
hypothetical protein; K07220 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative phosphate transport regulator
Uncharacterized protein id=3055580 bin=GWA2_Elusimicrobia_69_24 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
13_1_40cm_3_scaffold_98_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3462..4901
DNA (1440bp) protein (480aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILG4_KORVE
amino acid transporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
amino acid transporter
13_1_40cm_3_scaffold_98_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

5043..6098
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAH4_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Radical SAM domain protein
13_1_40cm_3_scaffold_98_8
unknown

Not on your lists

comp(6095..6769)
DNA (675bp) protein (225aa)

This feature has no annotations

13_1_40cm_3_scaffold_98_9

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comp(6785..7753)
DNA (969bp) protein (323aa)
Conserved protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR8_9BACT
Conserved protein {ECO:0000313|EMBL:AHN97952.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
hypothetical protein
13_1_40cm_3_scaffold_98_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7836..9116
DNA (1281bp) protein (427aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K14161 protein ImuB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA-directed DNA polymerase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5S3_SPHTD
13_1_40cm_3_scaffold_98_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

9349..12654
DNA (3306bp) protein (1102aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=RBG_16_Actinobacteria_67_10_curated
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III alpha subunit n=1 Tax=uncultured bacterium W5-102b RepID=H9BWL6_9BACT rbh
13_1_40cm_3_scaffold_98_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

12651..13229
DNA (579bp) protein (193aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_40cm_3_scaffold_98_13
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13265..14209
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DMD1_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:KGT74371.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japoni
hypothetical protein
13_1_40cm_3_scaffold_98_14
unknown

Not on your lists

14353..15135
DNA (783bp) protein (261aa)

This feature has no annotations

13_1_40cm_3_scaffold_98_15
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

15140..15676
DNA (537bp) protein (179aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] id=24524921 bin=RBG_19FT_COMBO_GAL15_69_19 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
methionine sulfoxide reductase A (EC:1.8.4.11)
13_1_40cm_3_scaffold_98_16
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(15673..19995)
DNA (4323bp) protein (1441aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
DEAD/H box helicase domain protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IVL6_PSEUL rbh
DEAD/DEAH box helicase
13_1_40cm_3_scaffold_98_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20024..21214)
DNA (1191bp) protein (397aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR7_9BACT
hydroxymethylbutenyl pyrophosphate reductase
Hydroxymethylbutenyl pyrophosphate reductase {ECO:0000313|EMBL:AHG91965.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_98_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(21219..22295)
DNA (1077bp) protein (359aa)
Gfo/Idh/MocA family oxidoreductase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CD05_MYXFH
Predicted dehydrogenase {ECO:0000313|EMBL:CDM66525.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Gfo/Idh/MocA family oxidoreductase
13_1_40cm_3_scaffold_98_19
unknown

Not on your lists

comp(22292..22639)
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_3_scaffold_98_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22789..23265)
DNA (477bp) protein (159aa)
hypothetical protein; K12073 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative Pol-Pal system-associated acyl-CoA thioesterase n=1 Tax=mine drainage metagenome RepID=E6PEA1_9ZZZZ
thioesterase superfamily protein
13_1_40cm_3_scaffold_98_21

Not on your lists

comp(23286..23714)
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHN97945.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
13_1_40cm_3_scaffold_98_22
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23894..24382
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL22 RepID=U9GY91_PSEAI
Transcriptional regulator {ECO:0000313|EMBL:EIV92180.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
TetR family transcriptional regulator
13_1_40cm_3_scaffold_98_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24379..26937)
DNA (2559bp) protein (853aa)
Putative helicase n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
helicase, DEAD/DEAH family
13_1_40cm_3_scaffold_98_24
unknown

Not on your lists

comp(27105..27296)
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_3_scaffold_98_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27437..28357)
DNA (921bp) protein (307aa)
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase id=2725411 bin=GWC2_Ignavibacteria_56_12 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_1_40cm_3_scaffold_98_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

28776..30890
DNA (2115bp) protein (705aa)
Methyl-accepting chemotaxis sensory transducer, class 44H n=2 Tax=Geobacter sulfurreducens RepID=D7AFC0_GEOSK
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
mcp44H; methyl-accepting chemotaxis sensory transducer, class 44H
13_1_40cm_3_scaffold_98_27
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

30977..32284
DNA (1308bp) protein (436aa)
OmpA/MotB domain-containing protein Tax=GWC2_Gemmatimonadetes_71_10_curated
OmpA/MotB domain protein id=2820705 bin=GWC2_Geobacteraceae_55_20 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
OmpA/MotB domain-containing protein
13_1_40cm_3_scaffold_98_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

32396..34075
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZD49_9GAMM
ompA family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
OmpA family protein
13_1_40cm_3_scaffold_98_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

35550..36206
DNA (657bp) protein (219aa)
Putative S9C family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A855_GEMAT
putative S9C family peptidase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative S9C family peptidase
13_1_40cm_3_scaffold_98_30
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

36350..38557
DNA (2208bp) protein (736aa)
Peptidase M14, carboxypeptidase A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028C7_SOLUE
peptidase M14, carboxypeptidase A Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M14 carboxypeptidase A
Displaying items 1-30 of 32 in total

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