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13_1_40cm_3_scaffold_1428_15

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: 17250..17795

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3L0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 178.0
  • Bit_score: 121
  • Evalue 6.90e-25
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Gemmatimonadetes_71_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 173.0
  • Bit_score: 164
  • Evalue 1.70e-37
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 174.0
  • Bit_score: 148
  • Evalue 1.90e-33

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Taxonomy

GWC2_Gemmatimonadetes_71_10_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 546
TTGCGCCTTGGAGCCGAGCTGACAGACGGTGACATTGTGAGGGCCGTGCTCGCAGGTGAGCGCGAGCGATACGCGCAGCTGGTCGAGCGCTATCGCGACCGGTACGCGCGTTACGCGGCGCGGATGCTGGGCTCGGCCGACGCAGCCGAGGATGCGGTGCAGGACGCGTTCGTGCGTGCCTTTGATCAGCTCGCACAGTGCAAGGAGCCCGACAATTTCCTGGGCTGGTTTTTTCTGATCCTGCGGAATCGCTGCTTTGCGGAACGGCGGCGCAGTCGGGCCACGGCGCCCTTGGAAGCAGCTGACAGCGTCGCGGCGGCGGATCGGACCGACGGGGGAGCAGAAACGGCCGAACGCCGCCGCGCGCTGCAGCTCGCGTTGCTCGAGTTGACGCCGGATCAGCGTGAAGTGTTCGTTCTGAAGCATGTCGAAGGGTTGTCATACGGACAGATTGCCGAGCGCTTGAGCACCTCGGTAGCGTCACTGAAGATGCGAATGCATCGCGCCTACGATCGACTGCGCCAAGAACTGCGGGAGCACGCATGA
PROTEIN sequence
Length: 182
LRLGAELTDGDIVRAVLAGERERYAQLVERYRDRYARYAARMLGSADAAEDAVQDAFVRAFDQLAQCKEPDNFLGWFFLILRNRCFAERRRSRATAPLEAADSVAAADRTDGGAETAERRRALQLALLELTPDQREVFVLKHVEGLSYGQIAERLSTSVASLKMRMHRAYDRLRQELREHA*