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13_1_40cm_3_scaffold_1428

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1428_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1..1860
DNA (1860bp) protein (620aa)
TonB-dependent receptor n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJT8_RHOM4
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AHG92657.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1428_2
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(1861..3489)
DNA (1629bp) protein (543aa)
Glycosyl hydrolase, BNR repeat-containing protein n=2 Tax=mine drainage metagenome RepID=T1AQH5_9ZZZZ
Glycosyl hydrolase, BNR repeat precursor
Glycosyl hydrolase, BNR repeat {ECO:0000313|EMBL:AIE84516.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas
13_1_40cm_3_scaffold_1428_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3486..4115)
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP46_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93368.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1428_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(5000..6247)
DNA (1248bp) protein (416aa)
Serpin (Serine proteinase inhibitor) n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBT3_SALRM
serine proteinase inhibitor; K13963 serpin B Tax=GWC2_Gemmatimonadetes_71_10_curated
serine proteinase inhibitor
13_1_40cm_3_scaffold_1428_5
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6389..6754
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZ58_HALH1
hypothetical protein Tax=RBG_13_Bacteroidetes_46_8_curated
hypothetical protein
13_1_40cm_3_scaffold_1428_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6709..7311
DNA (603bp) protein (201aa)
hypothetical protein; K00551 phosphatidylethanolamine N-methyltransferase [EC:2.1.1.17] Tax=GWC2_Gemmatimonadetes_71_10_curated
CHO2; phosphatidyl- ethanolamine N-methyltransferase (EC:2.1.1.17); K00551 phosphatidylethanolamine N-methyltransferase [EC:2.1.1.17]
Predicted protein n=2 Tax=Streptomyces RepID=D6AA26_9ACTO
13_1_40cm_3_scaffold_1428_7
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(7328..8485)
DNA (1158bp) protein (386aa)
Probable lipoprotein id=4178914 bin=GWA2_Ignavibacteria_55_11 species=Flavobacterium psychrophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
lipoprotein precursor Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical protein
13_1_40cm_3_scaffold_1428_8
unknown

Not on your lists

comp(8482..8877)
DNA (396bp) protein (132aa)

This feature has no annotations

13_1_40cm_3_scaffold_1428_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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9301..12012
DNA (2712bp) protein (904aa)
ligand-gated channel n=1 Tax=Salisaeta longa RepID=UPI0003B4BA4A
bfeA; ferric enterobactin receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
bfeA; ferric enterobactin receptor
13_1_40cm_3_scaffold_1428_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12025..14685
DNA (2661bp) protein (887aa)
TonB-dependent receptor n=1 Tax=uncultured bacterium W5-51b RepID=H9BX72_9BACT
TonB-dependent receptor Tax=RBG_16_Gemmatimonadetes_66_8_curated
TonB-dependent receptor
13_1_40cm_3_scaffold_1428_11
RLO_PLX_64_10, Bacteria

Not on your lists

comp(14778..15254)
DNA (477bp) protein (159aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
id=3479344 bin=GWC1_Spirochaetes_27_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
13_1_40cm_3_scaffold_1428_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15339..16424)
DNA (1086bp) protein (362aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_1428_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(16468..16818)
DNA (351bp) protein (117aa)
secreted salivary gland peptide, putative id=14625096 bin=bin7_NC10_sister species=Arctogadus glacialis genus=Arctogadus taxon_order=Gadiformes taxon_class=Actinopterygii phylum=Chordata tax=bin7_NC10_sister organism_group=NC10
secreted salivary gland peptide, putative Tax=CSP1_6_Rokubacteria
13_1_40cm_3_scaffold_1428_14
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16815..17141)
DNA (327bp) protein (109aa)
Sigma-70 region 2 n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SDK9_9ACTO
Sigma-70 region 2 {ECO:0000313|EMBL:EFQ82586.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
13_1_40cm_3_scaffold_1428_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17250..17795
DNA (546bp) protein (182aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3L0_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Gemmatimonadetes_71_10_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_3_scaffold_1428_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17792..18385
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI000375EB3A
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glycoside hydrolase family 13
13_1_40cm_3_scaffold_1428_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

18385..19047
DNA (663bp) protein (221aa)
hypothetical protein
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_3_scaffold_1428_18
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19121..21385
DNA (2265bp) protein (755aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:S
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E96A52
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
13_1_40cm_3_scaffold_1428_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

21586..21957
DNA (372bp) protein (124aa)
Putative NifU-like domain protein n=1 Tax=uncultured marine microorganism HF4000_ANIW137J11 RepID=B3T4R2_9ZZZZ
thioredoxin-like protein; K07400 Fe/S biogenesis protein NfuA Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
thioredoxin-like protein
13_1_40cm_3_scaffold_1428_20
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

22085..23131
DNA (1047bp) protein (349aa)
Biotin carboxylase-like protein id=4290030 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
biotin carboxylase-like Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_3_scaffold_1428_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

23128..23688
DNA (561bp) protein (187aa)
hypothetical protein; K13671 alpha-1,2-mannosyltransferase [EC:2.4.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C587F
hypothetical protein
Displaying 21 items

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