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13_1_40cm_3_scaffold_1613_4

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: comp(3455..4714)

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC94_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 414.0
  • Bit_score: 400
  • Evalue 1.80e-108
  • rbh
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.5
  • Coverage: 400.0
  • Bit_score: 448
  • Evalue 8.00e-123
secretion protein HlyD family protein similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 414.0
  • Bit_score: 400
  • Evalue 5.00e-109

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1260
GTGCCTTGTCTCGGGCACGTGGATATCCCACGCGCGCCAACCAAGAACCGCAAACGCTATGTCCAAGGCGGTATCGCCGCCGGCGGTTTGGTCCTGGTCACAATCCTGCTCGCCAGTCTCAAGCCGGCCGCGCCGAGTGTCGATCGCGAGGTCGTGTCACTGGACGCAGTCCGCCGCGGGACGATGGTGCGTGAAGTTCGTGGGCCGGGCACGCTCGTGCCCGAGCACATCCGCTGGATCTCGGCGCTCACTCCCGCGCGCGTCGAGCGCATTTTCGTCCAGCCCGGCATTCCGGTGCAGGCGAACACGGTGCTGCTCGAGCTTGCGAATCCGGACGTCCAAATCGAAGCGCTTGACGCCCAGCGCCAGCTCACGGCCGCTGAGGGTGAGCTCGTCAATCTGCGAACGAGCCTGCATGGCGCGCGGCTGACGCAGGCCGGCGTCGTCGCGTCGACGCGCAGCCTGTACCTCCAGGCAACACGCGACGCCGCGGTCGCCGACTCGCTCACGGTGATCGGCGGTCTGTCGCGCAATGACGTCACGCTGGCCCACGAAAAGGCGAGTGAGCTCGAGGCGCGCTACGACATCGAGAAGCAGCGGCTCGATCTCCTGACGTCGACGGTGGACTCGCAGCTTGCCGTACAGCGTGAGCAGGTCGTGCGGCTGCGCGCGATCACCGCGTTCCGGCTCAGCCGGCTCAGCTCGCTGCAGGTGCGGCCCGGCGAGGAGGGCGTCCTGTCGGAGCTCAACCTCCAACCCGGCCAGTGGGTCGTACCCGGGACGATTCTCGCGAAGGTCGTCCAGCCCGGAAAACTCAAAGCCGTCATTCGCATCCCCGAGACGCAGGCGCCCGGCCTCGCGATCGGGCAGGTCGCGTCGGTGGACACGCGCACCGGCATCGTCGCCGGCCACGTCATCCGTATCGATCCTTCCGCGCAAGAGGGAACGGTGACGGTGGACATCGCGCTGGACAGTACCCCCGGGTCGGCGCGGCCCGACATCAGCGTGGACGCGACGATCACGATCGAGCGGCTGACCGACGTGTTGTTCACGGGCCGTCCCGCGTATGGCCAGCCCAACAGCACGATCGGGATGTTCAAGCTCGTCGAAGGGGGACGCTACGCCGTTCGCGTGCCGGTGAAGGTGGGCCGCACGTCGGTCAATGCGATCGAAATCGTCCAAGGCCTCGCGGCCGGCGATTCGGTGATTCTGTCGGACATGACGCGGTACGACAACGTCGAGCGAGTGCGACTGAAATAA
PROTEIN sequence
Length: 420
VPCLGHVDIPRAPTKNRKRYVQGGIAAGGLVLVTILLASLKPAAPSVDREVVSLDAVRRGTMVREVRGPGTLVPEHIRWISALTPARVERIFVQPGIPVQANTVLLELANPDVQIEALDAQRQLTAAEGELVNLRTSLHGARLTQAGVVASTRSLYLQATRDAAVADSLTVIGGLSRNDVTLAHEKASELEARYDIEKQRLDLLTSTVDSQLAVQREQVVRLRAITAFRLSRLSSLQVRPGEEGVLSELNLQPGQWVVPGTILAKVVQPGKLKAVIRIPETQAPGLAIGQVASVDTRTGIVAGHVIRIDPSAQEGTVTVDIALDSTPGSARPDISVDATITIERLTDVLFTGRPAYGQPNSTIGMFKLVEGGRYAVRVPVKVGRTSVNAIEIVQGLAAGDSVILSDMTRYDNVERVRLK*