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13_1_40cm_3_scaffold_1613

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1613_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2..193)
DNA (192bp) protein (64aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABY7_GEMAT
permease
Permease {ECO:0000313|EMBL:AHG92918.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1613_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(205..942)
DNA (738bp) protein (246aa)
ABC transporter n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037C73BE
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC transporter related protein
13_1_40cm_3_scaffold_1613_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(975..3455)
DNA (2481bp) protein (827aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABY7_GEMAT rbh
permease
Permease {ECO:0000313|EMBL:AHG88903.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1613_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(3455..4714)
DNA (1260bp) protein (420aa)
Secretion protein HlyD family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC94_GEMAT rbh
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
secretion protein HlyD family protein
13_1_40cm_3_scaffold_1613_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4840..6573
DNA (1734bp) protein (578aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037FCAF6
PQQ-dependent dehydrogenase, methanol/ethanol family
PQQ-dependent dehydrogenase, methanol/ethanol family {ECO:0000313|EMBL:AHG91607.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1613_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6612..7031
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035E6308
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AHG91609.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1613_7

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7120..7728
DNA (609bp) protein (203aa)
Marine sediment metagenome DNA, contig: S01H4_L05693 {ECO:0000313|EMBL:GAG85163.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_3_scaffold_1613_8
unknown

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comp(7821..8204)
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_40cm_3_scaffold_1613_9
unknown

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comp(8292..8486)
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_3_scaffold_1613_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(8550..9269)
DNA (720bp) protein (240aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI00037238AF
protein kinase
13_1_40cm_3_scaffold_1613_11
Geobacillus thermodenitrificans, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9325..10323)
DNA (999bp) protein (333aa)
Thioredoxin reductase-like protein n=2 Tax=Geobacillus RepID=A4IQB5_GEOTN
thioredoxin reductase
Thioredoxin reductase-like protein {ECO:0000313|EMBL:ABO67519.1}; TaxID=420246 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus thermodenitrificans (
13_1_40cm_3_scaffold_1613_12
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10407..10574)
DNA (168bp) protein (56aa)
Transposase IS116/IS110/IS902 family protein n=3 Tax=Burkholderia cenocepacia RepID=A0AXT5_BURCH
Transposase {ECO:0000313|EMBL:CDI03906.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitr
transposase IS116/IS110/IS902 family protein
Displaying 12 items

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