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13_1_40cm_3_scaffold_23857_11

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: comp(6214..8385)

Top 3 Functional Annotations

Value Algorithm Source
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 349.0
  • Bit_score: 510
  • Evalue 2.90e-141
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G2_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 356.0
  • Bit_score: 418
  • Evalue 1.40e-113
  • rbh
tRNA-specific 2-thiouridylase mnmA similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 349.0
  • Bit_score: 445
  • Evalue 2.30e-122

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 2172
ATGACCAAGCGCGTCACGTATCTCGACAACGCCGCGACGACGCCGGTGCGGCCGGAGGTCCTCGAGGCCATGCTTCCCTATCTCGGGAAGGAAGCCTTCGGGAATCCGTCCTCGGCGCACCGCTTCGGCCGGGCGGCGCGTGCCAGCCTCGAGGAGGCGAAGCGCGCGGTCGCGACCGCCGTCGGCGCCGAGCCGAATCAGGTCGTGTTCACCTCGGGGGGCACGGAGGCGGACAACCTCGCGATCATCGGGGCGGCGCTCGCGTCGCGCGATCGCGGTGGTCCGTTTCGTGTCGCCGTCTCCGCCGCGGAGCACAAGGCGGGGTTAGCCGCCGCGCACGCGGTGAAGCACCTCGGTGGCGAAGAGATCGTGCTTCCGGTCACGGCGTCGGGCCTGGTCGACACCGCGGCGCTCGAGGCGGCGCTCCGGCGCGGCGTCGCGGTCGTCAGCGTGATGTGGGTCAACAACGAGGTCGGCACCGTCCAACCCGTGGGCGACGTGGCGACGCGATGTTGTGATTCCGGCGTGCTGTTCCATTCGGACGCCGTTCAGGCGTTCGGCAAGGTTCCGGTCTCGCTGCGCGACGTCAACTGCAGTCTCCTCACCATTTCCGGCCACAAGATCGGCGCCCCCAAGGGCGTCGGTGCACTCATCGTGCGCGACCGGAAGGCCGTGGAGGCGATCATCCACGGCGGGGGACAGCAATTCGGCATTCGGCCCGGGACCGAGAACGTCCCCGGCATCGTGGGGCTCGGGACGGCGGCCCGGCTGGCGGTCGAAGAGCAGCAGGCCCTGGCGGCGCGGCTGCGCGAGCTGCGCGATGAGCTGGAGCGCCGCCTGCTGGCGATCGTGCCCGACGCGGTGATCAATGGCTGGCAAGCCGAGCGCGCGCCGCACATTTCGAACGTCTCGATTCCCGGCACCGATAGCGAAGCGCTGCTGATGCATCTCGATCTCGCCGGCATTGCCTGCTCGTCCGGATCGGCGTGCAGCACCGGGTCGGTGGAACCGTCGCATGTGCTGACCGCGATGGGCGTCCCGCGTGAGCTCGGCATCGCCGCGCTGCGGTTCTCCTTCGGTCGTCGAGAAGGTGCGGTCGTTGTCCGCGGTCCTCCATCGATGAGAGTGCTCGTCGCGATGTCGGGCGGCGTGGACAGCTCCGTCGCCGCCGCGCTGCTCGTCGAGCAGGGCCACGAGGTGATCGGCGCGACGATGAAGCTGTTCTGCTATGGCGACAGTGTCCCCGACCGTCCGTGCTGCTCGCTGGACTCGATCACCGACGCGAAGCTGGTCGCCCACAAGCTCGGGATCCCGCATTACGTCCTCAATCTCGAGGACCGCTTCGGGCACGACGTCATCGACAACTTCGTGTCGGAGTACGCCCGCGGCCGGACGCCCATCCCGTGCGTGCGCTGCAACTCGTTCACCAAGTTCCGTGACTTCCTCTACCACGCCGATGCGCTCGACTGCGACGCGATCGCGACCGGTCATTACGCGATCGCGCAGCGTGGCGCGCTGTACCGCGGCCTCGACCGCCAGAAGGATCAGTCCTACTTCCTGTGGGGAATCGATCGCGCGGTGGTGCGGCGCATGGTGACGCCGGTGGGCGAGCTCACCAAGGCCGAAACCCGGTCGGTGGCACGGCGATTGGACCTGGTCACCGCCGACAAGCAGGAGTCGGTCGAGATCTGTTTTGTGCCGGACGACAATTACGTCGCGGTGCTCGAGAAGCACCTTCCCGCCGACGCACCGGCACTCGTCCCGGGTCCCCTCGTGACGACCAGTGGTGAGGTGATCGGCGAGCACGACGGCTTCGCGCGCTACACGGTCGGCCAGCGCCGCGGCCTGCCCGGTGGGTTCGGCGAGCCGCTGTACGTCGTGGCGATCCGGCCCGAGACCCGCGAGGTGGTCGTCGGCCGCGGGGCGGAGTTGTTCGGACACGAGCTGTCTCTGACAGAGGTCAACTGGCTCGCCGACCCGCTCGCGCCCGGGGACGCCGTGTGGGTGCAGTGCCGCTATCGCGCGCGTGCCGTCCCCGGCACGATTGCTGCGCAGGCGGACGGCCGCATCGCGCTCCGGCTCGCTGAGCCGGTCCGGGCGATCACACCAGGGCAGTCGGGCGTGCTGTACGACGCCGATGATCGACTGCTCGGCGGTGGGGTAATCGCCTAG
PROTEIN sequence
Length: 724
MTKRVTYLDNAATTPVRPEVLEAMLPYLGKEAFGNPSSAHRFGRAARASLEEAKRAVATAVGAEPNQVVFTSGGTEADNLAIIGAALASRDRGGPFRVAVSAAEHKAGLAAAHAVKHLGGEEIVLPVTASGLVDTAALEAALRRGVAVVSVMWVNNEVGTVQPVGDVATRCCDSGVLFHSDAVQAFGKVPVSLRDVNCSLLTISGHKIGAPKGVGALIVRDRKAVEAIIHGGGQQFGIRPGTENVPGIVGLGTAARLAVEEQQALAARLRELRDELERRLLAIVPDAVINGWQAERAPHISNVSIPGTDSEALLMHLDLAGIACSSGSACSTGSVEPSHVLTAMGVPRELGIAALRFSFGRREGAVVVRGPPSMRVLVAMSGGVDSSVAAALLVEQGHEVIGATMKLFCYGDSVPDRPCCSLDSITDAKLVAHKLGIPHYVLNLEDRFGHDVIDNFVSEYARGRTPIPCVRCNSFTKFRDFLYHADALDCDAIATGHYAIAQRGALYRGLDRQKDQSYFLWGIDRAVVRRMVTPVGELTKAETRSVARRLDLVTADKQESVEICFVPDDNYVAVLEKHLPADAPALVPGPLVTTSGEVIGEHDGFARYTVGQRRGLPGGFGEPLYVVAIRPETREVVVGRGAELFGHELSLTEVNWLADPLAPGDAVWVQCRYRARAVPGTIAAQADGRIALRLAEPVRAITPGQSGVLYDADDRLLGGGVIA*