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13_1_40cm_3_scaffold_23857

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_23857_1
unknown

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comp(2..253)
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_3_scaffold_23857_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(250..636)
DNA (387bp) protein (129aa)
putative amino acid aldolase or racemase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative amino acid aldolase or racemase id=4650281 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
alanine racemase
13_1_40cm_3_scaffold_23857_3
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(687..1292)
DNA (606bp) protein (202aa)
Putative amino acid aldolase or racemase id=4520583 bin=GWC2_Ignavibacteria_56_12 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
putative amino acid aldolase or racemase Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
alanine racemase domain protein
13_1_40cm_3_scaffold_23857_4
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1317..1715)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1AE41_9ZZZZ
hypothetical protein; K08972 putative membrane protein Tax=RBG_16_Gamma2_64_11_curated
hypothetical protein
13_1_40cm_3_scaffold_23857_5
unknown

Not on your lists

comp(1712..2206)
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_3_scaffold_23857_6
unknown

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comp(2206..2442)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_3_scaffold_23857_7

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2504..3289
DNA (786bp) protein (262aa)
Putative cyclase n=1 Tax=uncultured marine microorganism HF4000_APKG8K5 RepID=B3TB50_9ZZZZ
Putative cyclase {ECO:0000313|EMBL:ABZ09815.1}; TaxID=455555 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG8K5.;"
cyclase family protein
13_1_40cm_3_scaffold_23857_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3303..3944)
DNA (642bp) protein (214aa)
cefD; isopenicillin N epimerase (EC:5.1.1.17)
Isopenicillin N epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAJ1_GEMAT
class V aminotransferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_23857_9
Pseudomonas syringae group genomosp. 3, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4545..4931)
DNA (387bp) protein (129aa)
Membrane protein 39 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T6V9_ALCXX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO55146.1}; TaxID=223283 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syring
13_1_40cm_3_scaffold_23857_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(4984..6123)
DNA (1140bp) protein (380aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_3_scaffold_23857_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6214..8385)
DNA (2172bp) protein (724aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G2_GEMAT rbh
tRNA-specific 2-thiouridylase mnmA
13_1_40cm_3_scaffold_23857_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8405..9133)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G7_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_23857_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9126..10175)
DNA (1050bp) protein (350aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H4_GEMAT
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
MacB-like periplasmic core domain protein
13_1_40cm_3_scaffold_23857_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10321..10893)
DNA (573bp) protein (191aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIC3_KORVE id=5224104 bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical membrane protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
MacB-like periplasmic core domain protein
Displaying 14 items

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