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13_1_40cm_3_scaffold_2737_13

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: 9008..9559

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG7_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 167.0
  • Bit_score: 181
  • Evalue 5.70e-43
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 171.0
  • Bit_score: 243
  • Evalue 2.90e-61
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 170.0
  • Bit_score: 185
  • Evalue 1.10e-44

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 552
ATGGCCCGACAGGTGCTCGAGGACACTCTGACTGCTGACTCGATTGCGGCCGACACGGCTCTCGCGGCAAGCGGGGACGCCAGTGCATTCGAGCGGCTGTACCGGACTCACGTTGCGCGGGTCCATACGCTGGTGCGCCGCATGCTCGACGCCGATGAGGCGGACGACGTCACGCAGGATGTGTTCATTCGCGCGTGGCAGAAGCTGTCGACGTTCCGAGGCGAGTCGGCATTCGGGACGTGGTTGCACCGGCTGGCGGTGAACGTGGTCCTGGCTCGCCGCAAGCGCGTCGGGATCGAGCGCGGCCGATTCATTACCCAGGAAGAGCCGCTCGATGGCGTGACGAGCAAGCCGGTGACGCCGGAGCTGTCGATGGATTTCGAGCAAGCGCTGGCGAGCCTTCCCGAGGGAGCACGGCAGGTGTTCGTGTTGCACGACGTGGAGGGGTATCGCCACGAGGAAATAGCGCGCATGCTCGGCGTCGTGCCGGGCACGTCAAAATCGCAGCTGCATCATGCGCGGATGGCGCTGCGGAGGCACTTGGAACGATGA
PROTEIN sequence
Length: 184
MARQVLEDTLTADSIAADTALAASGDASAFERLYRTHVARVHTLVRRMLDADEADDVTQDVFIRAWQKLSTFRGESAFGTWLHRLAVNVVLARRKRVGIERGRFITQEEPLDGVTSKPVTPELSMDFEQALASLPEGARQVFVLHDVEGYRHEEIARMLGVVPGTSKSQLHHARMALRRHLER*