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13_1_40cm_3_scaffold_2737

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2737_1
unknown

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2..91
DNA (90bp) protein (30aa)

This feature has no annotations

13_1_40cm_3_scaffold_2737_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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109..1044
DNA (936bp) protein (312aa)
Inosine/uridine-preferring nucleoside hydrolase; K01250 pyrimidine-specific ribonucleoside hydrolase [EC:3.2.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Inosine/uridine-preferring nucleoside hydrolase n=2 Tax=Chloroflexus RepID=A9WE72_CHLAA
inosine/uridine-preferring nucleoside hydrolase
13_1_40cm_3_scaffold_2737_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

1041..2006
DNA (966bp) protein (322aa)
Putative hydroxlacyl-CoA dehydrogenase n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4U0W1_BORBO
hydroxlacyl-CoA dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hydroxlacyl-CoA dehydrogenase
13_1_40cm_3_scaffold_2737_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1957..2391)
DNA (435bp) protein (145aa)
Universal stress protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF7_GEMAT
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AHG91899.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_2737_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(2391..3731)
DNA (1341bp) protein (447aa)
Divalent metal cation transporter MntH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF8_GEMAT
mntH; putative manganese transport protein MntH; K03322 manganese transport protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Manganese transport protein mntH
13_1_40cm_3_scaffold_2737_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(3721..4419)
DNA (699bp) protein (233aa)
DtxR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF6_GEMAT
DtxR family transcriptional regulator; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
DtxR family transcriptional regulator
13_1_40cm_3_scaffold_2737_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(4514..5092)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG0_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_2737_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(5122..5916)
DNA (795bp) protein (265aa)
short-chain dehydrogenase Tax=RBG_16_Gemmatimonadetes_66_8_curated
short-chain dehydrogenase id=14429590 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
short-chain dehydrogenase
13_1_40cm_3_scaffold_2737_9
unknown

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comp(6207..6539)
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_40cm_3_scaffold_2737_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6708..7142
DNA (435bp) protein (145aa)
sodium:dicarboxylate symporter n=1 Tax=Laceyella sacchari RepID=UPI0003B5CADE
sodium:dicarboxylate symporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
sodium:dicarboxylate symporter
13_1_40cm_3_scaffold_2737_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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7139..8254
DNA (1116bp) protein (372aa)
Glycosyl transferase family 2 n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SCC1_PELPB
glycosyl transferase family 2 protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
glycosyl transferase family 2
13_1_40cm_3_scaffold_2737_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8251..8949)
DNA (699bp) protein (233aa)
High-affinity nickel-transporter protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5F2_GEMAT
high-affinity nickel-transporter protein
High-affinity nickel-transporter protein {ECO:0000313|EMBL:BAH37462.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aura
13_1_40cm_3_scaffold_2737_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9008..9559
DNA (552bp) protein (184aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG7_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_3_scaffold_2737_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9556..10176
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B5ED6C
Putative transmembrane anti-sigma factor Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_2737_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10189..11280
DNA (1092bp) protein (364aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein id=8266372 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
13_1_40cm_3_scaffold_2737_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11294..12070
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAH0_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
protein of unknown function DUF4098
13_1_40cm_3_scaffold_2737_17
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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12154..15150
DNA (2997bp) protein (999aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG4_GEMAT rbh
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein
13_1_40cm_3_scaffold_2737_18
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

15110..17398
DNA (2289bp) protein (763aa)
Putative helicase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG5_GEMAT
putative helicase Tax=RBG_16_Actinobacteria_67_10_curated
putative helicase
13_1_40cm_3_scaffold_2737_19
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

17409..18059
DNA (651bp) protein (217aa)
pyrophosphatase PpaX; K06019 pyrophosphatase PpaX [EC:3.6.1.1] Tax=RBG_16_Acidobacteria_68_9_curated
pyrophosphatase n=1 Tax=Bacillus coahuilensis RepID=UPI000185134C
pyrophosphatase
13_1_40cm_3_scaffold_2737_20
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

18056..18616
DNA (561bp) protein (187aa)
aminotransferase (EC:2.6.1.-); K00837 [EC:2.6.1.-] id=24408260 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
aminotransferase (EC:2.6.1.-); K00837 [EC:2.6.1.-] Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
putative aminotransferase (EC:2.6.1.-)
Displaying 20 items

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