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13_1_40cm_3_scaffold_417_12

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: comp(9274..9756)

Top 3 Functional Annotations

Value Algorithm Source
cheD; chemotaxis protein CheD; K03411 chemotaxis protein CheD [EC:3.5.1.44] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 159.0
  • Bit_score: 169
  • Evalue 4.60e-39
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A895_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 160.0
  • Bit_score: 143
  • Evalue 2.50e-31
cheD; chemotaxis protein CheD similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 160.0
  • Bit_score: 141
  • Evalue 2.10e-31

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 483
GTGAAGGAAGTCATCGTCAGCGTGGCCGATTGGGCAGCCGAGCGTGGGGACGGCGTACTGGTGACCCTGGGACTCGGCTCGTGCGTCGCCATCATGCTGCACGATGCCCAGGCCCGGGCGGGAGCGATGGCCCATGTGCTGCTCCCCTCGATAAGCCTCGCGCGCGACATCAGCAACAGAGCAAAGTTTCCGGAGACGGCCGTGCCGTTGCTGATCGAGCAGCTCAAGGGACTGGGCGCCGACCCGCGCCGTCTGGTCGCCAAACTGGCCGGCGGCGCCAGCATGTTCGGCCAGCTCGTCACGCCCGGTACGATTCAGATGGGGGAGCGCAATCTGCTGGCGGCGCGAACCGCGCTGCGTGCCGCGGCTATTCCGATCGTCCGGGAATCGGTCGGGGGAGAGCGCGGCCGCAGCGTGCGCTTTCACGTCAAGGACGGCCGGGTGGAGATCCGCTCGGTTGGAGCCGATGTCGCCGTCATCTGA
PROTEIN sequence
Length: 161
VKEVIVSVADWAAERGDGVLVTLGLGSCVAIMLHDAQARAGAMAHVLLPSISLARDISNRAKFPETAVPLLIEQLKGLGADPRRLVAKLAGGASMFGQLVTPGTIQMGERNLLAARTALRAAAIPIVRESVGGERGRSVRFHVKDGRVEIRSVGADVAVI*