ggKbase home page

13_1_40cm_3_scaffold_417

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_417_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(67..1086)
DNA (1020bp) protein (340aa)
ftsI; cell division protein FtsI (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=GWC2_Gemmatimonadetes_71_10_curated
Cell division protein FtsI n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8A4_GEMAT
penicillin-binding protein transpeptidase
13_1_40cm_3_scaffold_417_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1029..1994)
DNA (966bp) protein (322aa)
ftsI; cell division protein FtsI (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=GWC2_Gemmatimonadetes_71_10_curated
Cell division protein FtsI/penicillin-binding protein 2 n=1 Tax=Frankia sp. QA3 RepID=I9KGC2_9ACTO
penicillin-binding protein transpeptidase
13_1_40cm_3_scaffold_417_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1994..2293)
DNA (300bp) protein (100aa)
Cell division protein FtsL family protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_3_scaffold_417_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2283..3179)
DNA (897bp) protein (299aa)
mraW; putative S-adenosyl-methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000255|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000255|HAMAP-Rule:MF_0100
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RSMH_GEMAT
13_1_40cm_3_scaffold_417_trna_3
unknown

Not on your lists

comp(3315..3388)
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_417_5
unknown

Not on your lists

comp(3437..4078)
DNA (642bp) protein (214aa)

This feature has no annotations

13_1_40cm_3_scaffold_417_6
unknown

Not on your lists

4591..4890
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_3_scaffold_417_trna_2
unknown

Not on your lists

comp(5238..5311)
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_417_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5495..6409)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A899_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_417_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6355..7188)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A898_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_417_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7185..7655)
DNA (471bp) protein (157aa)
Chemotaxis protein CheW n=1 Tax=Desulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30) RepID=M1WNQ0_DESPC
cheW2; chemotaxis protein Chew Tax=GWC2_Gemmatimonadetes_71_10_curated
cheW; Chemotaxis protein CheW
13_1_40cm_3_scaffold_417_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7652..8077)
DNA (426bp) protein (142aa)
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_417_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8166..9290)
DNA (1125bp) protein (375aa)
cheB; chemotaxis response regulator protein-glutamate methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemm
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A896_GEMAT
13_1_40cm_3_scaffold_417_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9274..9756)
DNA (483bp) protein (161aa)
cheD; chemotaxis protein CheD; K03411 chemotaxis protein CheD [EC:3.5.1.44] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A895_GEMAT
cheD; chemotaxis protein CheD
13_1_40cm_3_scaffold_417_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9753..10541)
DNA (789bp) protein (263aa)
chemotaxis protein CheR (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] id=7201336 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal
MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal {ECO:0000313|EMBL:AHG90599.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_417_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10538..12154)
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A894_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_417_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12154..14109)
DNA (1956bp) protein (652aa)
Chromosomal replication initiator protein dnaA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A893_GEMAT
DnaA family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DnaA family protein
13_1_40cm_3_scaffold_417_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14106..14708)
DNA (603bp) protein (201aa)
gliding motility protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ARF/SAR superfamily protein
mglA; Mutual gliding-motility protein; K06883 id=7201339 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
13_1_40cm_3_scaffold_417_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14712..15188)
DNA (477bp) protein (159aa)
Roadblock/LC7 family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
roadblock/LC7 family protein
Roadblock/LC7 family protein id=4847301 bin=GWC2_Deltaproteobacteria_42_51 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
13_1_40cm_3_scaffold_417_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15185..15532)
DNA (348bp) protein (116aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_417_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15529..16374)
DNA (846bp) protein (282aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetratricopeptide domain protein id=4614255 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_3_scaffold_417_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16367..17503)
DNA (1137bp) protein (379aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=7201343 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
13_1_40cm_3_scaffold_417_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17507..20206)
DNA (2700bp) protein (900aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A890_GEMAT rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_417_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20203..20820)
DNA (618bp) protein (206aa)
Chemotaxis protein CheC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A889_GEMAT
cheC; chemotaxis protein CheC; K03410 chemotaxis protein CheC Tax=GWC2_Gemmatimonadetes_71_10_curated
cheC; chemotaxis protein CheC
13_1_40cm_3_scaffold_417_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20917..22878)
DNA (1962bp) protein (654aa)
cheA; chemotaxis protein CheA (EC:2.7.13.3); K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
cheA; chemotaxis protein CheA (EC:2.7.13.3)
Chemotaxis protein CheA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A888_GEMAT
13_1_40cm_3_scaffold_417_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22881..23243)
DNA (363bp) protein (121aa)
Chemotaxis protein CheY homolog n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A887_GEMAT
chemotaxis protein CheY homolog; K03413 two-component system, chemotaxis family, response regulator CheY Tax=GWC2_Gemmatimonadetes_71_10_curated
chemotaxis protein CheY homolog
13_1_40cm_3_scaffold_417_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23254..23742)
DNA (489bp) protein (163aa)
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_3_scaffold_417_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23735..24745)
DNA (1011bp) protein (337aa)
rluD; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Pseudouridine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A885_GEMAT
pseudouridine synthase, RluA family
13_1_40cm_3_scaffold_417_27
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(24742..25257)
DNA (516bp) protein (172aa)
lspA; lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Lipoprotein signal peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A883_GEMAT
Lipoprotein signal peptidase
13_1_40cm_3_scaffold_417_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25241..25663)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A882_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
Displaying items 1-30 of 63 in total

View Taxonomy