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13_1_40cm_3_scaffold_1892

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1892_1

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2..706
DNA (705bp) protein (235aa)
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=PURQ_MOOTA
Marine sediment metagenome DNA, contig: S01H1_L01385 {ECO:0000313|EMBL:GAF79265.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
phosphoribosylformylglycinamidine synthase I
13_1_40cm_3_scaffold_1892_2
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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718..1554
DNA (837bp) protein (279aa)
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3A7_SPHTD
13_1_40cm_3_scaffold_1892_3
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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1562..2812
DNA (1251bp) protein (417aa)
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000255|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000255|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000255|HAMAP-Rule:MF_00420};; Formyl
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=PURL_MOOTA
13_1_40cm_3_scaffold_1892_4
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

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2815..4275
DNA (1461bp) protein (487aa)
amidophosphoribosyltransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=RBG_13_Actinobacteria_55_18_curated
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
hypothetical protein n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI000368CE6C
13_1_40cm_3_scaffold_1892_5
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4281..5234
DNA (954bp) protein (318aa)
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CFX2_MYXFH
13_1_40cm_3_scaffold_1892_6
Cyanobium sp. CACIAM 14, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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5417..5803
DNA (387bp) protein (129aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent n=1 Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9P4Z9_CYAGP
phosphoribosylformylglycinamidine synthase, clade II
13_1_40cm_3_scaffold_1892_7
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5778..7304
DNA (1527bp) protein (509aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSW4_9FIRM
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellac
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
13_1_40cm_3_scaffold_1892_8
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

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7317..8063
DNA (747bp) protein (249aa)
tryptophan 2,3-dioxygenase (EC:1.13.11.11)
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAM
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036D571C
13_1_40cm_3_scaffold_1892_9
unknown

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8099..8239
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_40cm_3_scaffold_1892_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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8236..9294
DNA (1059bp) protein (353aa)
aminotransferase V n=1 Tax=Patulibacter americanus RepID=UPI0003B74F07
class V aminotransferase Tax=RBG_16_Actinobacteria_68_12_curated
cysteine desulfurase
13_1_40cm_3_scaffold_1892_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(9291..10745)
DNA (1455bp) protein (485aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZT8_CONWI
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ADB49914.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;"
13_1_40cm_3_scaffold_1892_12
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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10851..11342
DNA (492bp) protein (164aa)
Transcriptional regulator, MarR family n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8LGX6_FRASN
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABW12747.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
13_1_40cm_3_scaffold_1892_13
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(11347..12459)
DNA (1113bp) protein (371aa)
Acetyl-CoA acetyltransferase n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RS72_MYCRN
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AEV74029.1}; TaxID=710685 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strai
13_1_40cm_3_scaffold_1892_14
unknown

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comp(12487..12735)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_3_scaffold_1892_15
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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comp(12781..13917)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000364B18E
Na+ ABC efflux pump permease; K09696 sodium transport system permease protein Tax=RBG_13_Chloroflexi_66_10_curated
ABC transporter
13_1_40cm_3_scaffold_1892_16
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

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comp(13914..14639)
DNA (726bp) protein (242aa)
Sodium ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ62_9GAMM
ABC transporter related protein {ECO:0000313|EMBL:KKW01876.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
Na+ ABC transporter ATPase
13_1_40cm_3_scaffold_1892_17
unknown

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comp(14639..15037)
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_40cm_3_scaffold_1892_18
RLO_PLX_64_10, Bacteria

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15116..16042
DNA (927bp) protein (309aa)
Aspartate carbamoyltransferase; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
aspartate carbamoyltransferase (EC:2.1.3.2)
Uncharacterized protein n=1 Tax=Thellungiella salsuginea RepID=V4LVG5_THESL
13_1_40cm_3_scaffold_1892_19
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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16039..16587
DNA (549bp) protein (183aa)
uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UES8_CELFN
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain AT
13_1_40cm_3_scaffold_1892_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16448..18352)
DNA (1905bp) protein (635aa)
Putative thioesterase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI90_9GAMM
Putative thioesterase {ECO:0000313|EMBL:EIL99181.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thi
hypothetical protein
13_1_40cm_3_scaffold_1892_21
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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18486..20909
DNA (2424bp) protein (808aa)
carbamoyl-phosphate synthase large subunit (EC:6.3.4.16)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales
Carbamoyl-phosphate synthase large chain n=2 Tax=Desulfotomaculum RepID=F6B468_DESCC
13_1_40cm_3_scaffold_1892_22
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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20938..21696
DNA (759bp) protein (253aa)
Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QMI6_DESB2
dihydroorotate dehydrogenase electron transfer subunit
Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain protein {ECO:0000313|EMBL:ADK86229.1}; TaxID=644282 species="Bacteria; Proteobacteria; Deltaproteobacteria;
13_1_40cm_3_scaffold_1892_23
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

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21705..22607
DNA (903bp) protein (301aa)
Dihydroorotate dehydrogenase n=1 Tax=Dehalococcoides mccartyi BTF08 RepID=M1RF78_9CHLR
dihydroorotate dehydrogenase 1B
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule
13_1_40cm_3_scaffold_1892_24
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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22618..23304
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036DCF10
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB30230.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 /
13_1_40cm_3_scaffold_1892_25
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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23431..23805
DNA (375bp) protein (125aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HYY8_CALAS
putative ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein Tax=CG_Anaero_03
putative ABC transporter ATP-binding protein
Displaying 25 items

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