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13_1_40cm_3_scaffold_2219

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2219_1
unknown

Not on your lists

comp(2..178)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_3_scaffold_2219_2
unknown

Not on your lists

comp(224..520)
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_40cm_3_scaffold_2219_3
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(894..2654)
DNA (1761bp) protein (587aa)
Aspartate--tRNA ligase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CG11_THET1
aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ACZ41867.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_3_scaffold_2219_4
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2651..3907)
DNA (1257bp) protein (419aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=24461266 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
13_1_40cm_3_scaffold_2219_5
unknown

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3960..4292
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_40cm_3_scaffold_2219_6
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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comp(4348..5958)
DNA (1611bp) protein (537aa)
PAS fold family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VZF4_9CYAN
multi-sensor hybrid histidine kinase Tax=RBG_16_Chloroflexi_54_18_curated
multi-sensor hybrid histidine kinase
13_1_40cm_3_scaffold_2219_7
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5958..7451)
DNA (1494bp) protein (498aa)
Type II secretion system protein E n=2 Tax=Ruegeria RepID=C9CZL1_9RHOB
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:EEW58563.1}; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibact
13_1_40cm_3_scaffold_2219_8
unknown

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comp(7448..8284)
DNA (837bp) protein (279aa)

This feature has no annotations

13_1_40cm_3_scaffold_2219_9
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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8375..9610
DNA (1236bp) protein (412aa)
response regulator receiver protein; K02282 pilus assembly protein CpaE id=14628924 bin=bin8_Chloro species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
histidine kinase
Tax=BJP_08E140C01_Actinomycetales_67_18
13_1_40cm_3_scaffold_2219_10
Dietzia cinnamea, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9571..10107
DNA (537bp) protein (179aa)
TadE family protein n=1 Tax=Dietzia cinnamea P4 RepID=E6JCZ4_9ACTO
TadE family protein {ECO:0000313|EMBL:EFV90495.1}; TaxID=910954 species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia cinnamea P4.;"
13_1_40cm_3_scaffold_2219_11
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

10101..10721
DNA (621bp) protein (207aa)
TadE-like protein Tax=RBG_16_RIF_CHLX_72_14_curated
13_1_40cm_3_scaffold_2219_12
unknown

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10721..11464
DNA (744bp) protein (248aa)

This feature has no annotations

13_1_40cm_3_scaffold_2219_13
unknown

Not on your lists

comp(11313..11651)
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_3_scaffold_2219_14
unknown

Not on your lists

11668..13002
DNA (1335bp) protein (445aa)

This feature has no annotations

Displaying 14 items

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