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13_1_40cm_3_scaffold_2460

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2460_1
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(3..1334)
DNA (1332bp) protein (444aa)
Carboxyl transferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NRD8_ROSCS
carboxyl transferase
Carboxyl transferase {ECO:0000313|EMBL:ABU60134.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus casten
13_1_40cm_3_scaffold_2460_2
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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1446..2375
DNA (930bp) protein (310aa)
RuBisCO operon transcriptional regulator id=14629324 bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
RuBisCO operon transcriptional regulator Tax=CSP1_4_Chloroflexi
RuBisCO operon transcriptional regulator
13_1_40cm_3_scaffold_2460_3
unknown

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2384..3634
DNA (1251bp) protein (417aa)

This feature has no annotations

13_1_40cm_3_scaffold_2460_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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3618..4328
DNA (711bp) protein (237aa)
beta-lactamase id=14425170 bin=bin1_lowGC species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin1_lowGC organism_group=Unknown_CP
beta-lactamase Tax=CSP1_2_Dadabacteria
beta-lactamase-like protein
13_1_40cm_3_scaffold_2460_5
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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4369..5655
DNA (1287bp) protein (429aa)
Amidase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXJ7_TRURR
amidase
Amidase {ECO:0000313|EMBL:ADI14599.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 1
13_1_40cm_3_scaffold_2460_6
Thermobaculum terrenum, Thermobaculum, Bacteria

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5652..7634
DNA (1983bp) protein (661aa)
von Willebrand factor type A (VWA) domain protein-like protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDB2_THET1 rbh
von Willebrand factor A
von Willebrand factor type A (VWA) domain protein-like protein {ECO:0000313|EMBL:ACZ42777.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP
13_1_40cm_3_scaffold_2460_7
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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7671..9212
DNA (1542bp) protein (514aa)
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3D7_SPHTD
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
13_1_40cm_3_scaffold_2460_8
Synechococcus sp. PCC 7502, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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9213..9563
DNA (351bp) protein (117aa)
Putative Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Synechococcus sp. PCC 7502 RepID=K9STM2_9SYNE
DNA uptake Rossmann fold nucleotide-binding protein
Putative Rossmann fold nucleotide-binding protein involved in DNA uptake {ECO:0000313|EMBL:AFY73505.1}; TaxID=1173263 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococ
13_1_40cm_3_scaffold_2460_9
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

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9568..10263
DNA (696bp) protein (232aa)
molybdenum cofactor biosynthesis protein D/E; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=CG_Delta_07
Molybdopterin converting factor, subunits 1/2 n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MZ90_CORCM
moaDE; molybdopterin converting factor, subunits 1/2
13_1_40cm_3_scaffold_2460_10
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(10419..10913)
DNA (495bp) protein (165aa)
O-methyltransferase, family 3 n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UWJ2_ROSS1
O-methyltransferase family protein
O-methyltransferase family 3 {ECO:0000313|EMBL:ABU57890.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexu
13_1_40cm_3_scaffold_2460_11
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(10900..11349)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6H6_SPHTD
hypothetical protein Tax=RBG_16_Chloroflexi_56_8_curated
hypothetical protein
13_1_40cm_3_scaffold_2460_12
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

11563..12249
DNA (687bp) protein (229aa)
ATP-dependent Clp protease, proteolytic subunit; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S0E3_DESTD
13_1_40cm_3_scaffold_2460_13
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12206..13324)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6G3W6_RALS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG70013.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacear
13_1_40cm_3_scaffold_2460_14
Dehalogenimonas lykanthroporepellens, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(13321..14043)
DNA (723bp) protein (241aa)
Beta-lactamase domain-containing protein n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1Z5_DEHLB
beta-lactamase domain-containing protein
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:ADJ26623.1}; TaxID=552811 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas lykanthroporepellens (s
13_1_40cm_3_scaffold_2460_15
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(14069..15754)
DNA (1686bp) protein (562aa)
DNA ligase I, ATP-dependent (dnl1); K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RBG_16_RIF_CHLX_72_14_curated
Probable DNA ligase id=2876705 bin=GWC2_Chloroflexi_73_18 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
DNA ligase I
13_1_40cm_3_scaffold_2460_16
unknown

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15776..15988
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_3_scaffold_2460_17
unknown

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16053..16379
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_3_scaffold_2460_18
unknown

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16697..17038
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_3_scaffold_2460_19
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(17133..17315)
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Candidatus Nitrosoarchaeum RepID=S2ETH9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA05634.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
hypothetical protein
Displaying 19 items

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