ggKbase home page

13_1_40cm_3_scaffold_3945

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3945_1
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..558
DNA (558bp) protein (186aa)
Type II secretion system F domain protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QTM3_ACEAZ
type II secretion system F domain protein
Type II secretion system F domain protein {ECO:0000313|EMBL:ADL11787.1}; Flags: Precursor;; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;
13_1_40cm_3_scaffold_3945_2
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

559..1434
DNA (876bp) protein (292aa)
Type II secretion system protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5USS7_ROSS1
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:ABQ89680.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseif
13_1_40cm_3_scaffold_3945_3
unknown

Not on your lists

1461..1751
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_3_scaffold_3945_4
unknown

Not on your lists

1764..1931
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_3_scaffold_3945_5
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1928..2857)
DNA (930bp) protein (310aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZI8_9PLAN
13_1_40cm_3_scaffold_3945_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2854..4017)
DNA (1164bp) protein (388aa)
GTPase Obg n=1 Tax=Thermus sp. CCB_US3_UF1 RepID=G8NB89_9DEIN
GTPase obg; K03979 GTP-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
GTP-binding protein Obg/CgtA
13_1_40cm_3_scaffold_3945_7
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4106..4408)
DNA (303bp) protein (101aa)
50S ribosomal protein L27 n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VK76_9CYAN
LSU ribosomal protein L27P
Tax=BJP_IG2158_Thermincola_46_17
13_1_40cm_3_scaffold_3945_8
unknown

Not on your lists

4673..4777
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_40cm_3_scaffold_3945_9
unknown

Not on your lists

4973..5161
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_3_scaffold_3945_10
unknown

Not on your lists

comp(5294..6103)
DNA (810bp) protein (270aa)

This feature has no annotations

13_1_40cm_3_scaffold_3945_11
unknown

Not on your lists

comp(6100..7143)
DNA (1044bp) protein (348aa)

This feature has no annotations

13_1_40cm_3_scaffold_3945_12
unknown

Not on your lists

comp(7133..7675)
DNA (543bp) protein (181aa)

This feature has no annotations

13_1_40cm_3_scaffold_3945_13
unknown

Not on your lists

comp(7672..9318)
DNA (1647bp) protein (549aa)

This feature has no annotations

13_1_40cm_3_scaffold_3945_14
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9436..12003)
DNA (2568bp) protein (856aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=2 Tax=Geobacter metallireducens RepID=Q39X26_GEOMG
valS; valyl-tRNA ligase
13_1_40cm_3_scaffold_3945_15
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12066..12632)
DNA (567bp) protein (189aa)
Short-chain dehydrogenase/reductase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KEY0_SACES
Short-chain dehydrogenase/reductase
Short-chain dehydrogenase/reductase {ECO:0000313|EMBL:CCH35068.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espana
13_1_40cm_3_scaffold_3945_16
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13183..13608
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEDE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH07777.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Displaying 16 items

View Taxonomy