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13_1_40cm_3_scaffold_406

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_406_1
unknown

Not on your lists

2..166
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_3_scaffold_406_2
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182..502)
DNA (321bp) protein (107aa)
UPF0102 protein DesfrDRAFT_0910 n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JTG1_DESFR
UPF0102 protein DesfrDRAFT_0910 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source
endonuclease
13_1_40cm_3_scaffold_406_3
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(517..1089)
DNA (573bp) protein (191aa)
Ribonuclease H (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Thermincola potens (strain JR) RepID=D5X8K9_THEPJ
13_1_40cm_3_scaffold_406_4
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1144..1578)
DNA (435bp) protein (145aa)
50S ribosomal protein L19 n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GKM0_9FIRM
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;"
13_1_40cm_3_scaffold_406_5
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1578..2114)
DNA (537bp) protein (179aa)
tRNA (Guanine37-N1) methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00605}; EC=2.1.1.228 {ECO:0000255|HAMAP-Rule:MF_00605};; M1G-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltr
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=TRMD_MOOTA
13_1_40cm_3_scaffold_406_6
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(2209..2715)
DNA (507bp) protein (169aa)
Ribosome maturation factor RimM n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=RIMM_DEHE1
rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=CG_Arma_02
rimM; 16S rRNA processing protein RimM
13_1_40cm_3_scaffold_406_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2712..3128)
DNA (417bp) protein (139aa)
UPF0109 protein Cwoe_3681 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1D5_CONWI
hypothetical protein
UPF0109 protein Cwoe_3681 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibact
13_1_40cm_3_scaffold_406_8
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3091..3339)
DNA (249bp) protein (83aa)
30S ribosomal protein S16 n=1 Tax=Desmospora sp. 8437 RepID=F5SCQ0_9BACL
rpsP; 30S ribosomal protein S16
Tax=BJP_08E140C01_Clostridiales_46_19
13_1_40cm_3_scaffold_406_9
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3380..4678)
DNA (1299bp) protein (433aa)
Signal recognition particle protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QBH2_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clos
signal recognition particle subunit FFH/SRP54 (srp54)
13_1_40cm_3_scaffold_406_10
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4679..5002)
DNA (324bp) protein (108aa)
UPF0122 protein STH1464 n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Y1464_SYMTH
hypothetical protein
UPF0122 protein STH1464 {ECO:0000255|HAMAP-Rule:MF_00245}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermop
13_1_40cm_3_scaffold_406_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

5044..5334
DNA (291bp) protein (97aa)
Transcriptional regulator, AsnC family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEE0_CONWI
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADB53632.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="C
13_1_40cm_3_scaffold_406_12
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

5448..6113
DNA (666bp) protein (222aa)
Putative myo-inositol-3-phosphate phosphatase n=1 Tax=Micromonospora olivasterospora RepID=Q2MFZ5_MICOL
inositol monophosphatase/fructose-1,6-bisphosphatase family protein Tax=RBG_16_RIF_CHLX_70_13_curated
inositol monophosphatase
13_1_40cm_3_scaffold_406_13

Not on your lists

comp(6081..6782)
DNA (702bp) protein (234aa)
Phosphotransferase domain-containing protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0Z8F0_9ZZZZ
Phosphotransferase domain-containing protein {ECO:0000313|EMBL:EQD44281.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage
putative metal-dependent phosphoesterase, PHP family
13_1_40cm_3_scaffold_406_14
Prunus persica, Prunus, Rosales, rosids, Streptophyta, Viridiplantae

Not on your lists


comp(6779..7015)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Prunus persica RepID=M5X7X2_PRUPE
Uncharacterized protein {ECO:0000313|EMBL:EMJ21566.1}; TaxID=3760 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
ftsY; cell division protein FtsY, signal recognition particle-docking protein FtsY
13_1_40cm_3_scaffold_406_15
Bhargavaea cecembensis, Bhargavaea, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7622..10816)
DNA (3195bp) protein (1065aa)
Chromosome partition protein Smc n=1 Tax=Bhargavaea cecembensis DSE10 RepID=M7NJZ0_9BACL
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1235279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Bhargavaea.;" source="Bhargavaea cecembensis DSE10
chromosome segregation protein SMC
13_1_40cm_3_scaffold_406_16
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(10897..11841)
DNA (945bp) protein (315aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
Ribonuclease 3 n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CX67_9FIRM
ribonuclease III
13_1_40cm_3_scaffold_406_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11808..12080)
DNA (273bp) protein (91aa)
Acyl carrier protein id=2638132 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acpP; acyl carrier protein; K02078 acyl carrier protein Tax=GWA2_Rokubacteria_70_23_curated
acpP; acyl carrier protein
13_1_40cm_3_scaffold_406_18
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12156..12896)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI0003773D2D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ24077.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
13_1_40cm_3_scaffold_406_19
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13040..13906)
DNA (867bp) protein (289aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoacti
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Desmospora sp. 8437 RepID=F5SCR6_9BACL
malonyl CoA-acyl carrier protein transacylase
13_1_40cm_3_scaffold_406_20
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14159..14566)
DNA (408bp) protein (136aa)
ATPase subunit H n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AW91_RUBXD
hypothetical protein Tax=RBG_16_Actinobacteria_64_13_curated
ATPase subunit H
13_1_40cm_3_scaffold_406_21
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14641..15150)
DNA (510bp) protein (170aa)
phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyr
Phosphopantetheine adenylyltransferase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NE95_DESAR
13_1_40cm_3_scaffold_406_22
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(15151..15690)
DNA (540bp) protein (180aa)
Methyltransferase id=2027172 bin=GWD2_Nitrospirae-related_57_8 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
methyltransferase Tax=GWC2_Nitrospirae_57_13_curated
ylbH; putative methyltransferase
13_1_40cm_3_scaffold_406_23
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(15691..16689)
DNA (999bp) protein (333aa)
Selenide, water dikinase id=1775748 bin=GWE2_Bacteroidetes_42_24 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
Selenide, water dikinase
Tax=BJP_IG2103_Bacteroidetes_41_9
13_1_40cm_3_scaffold_406_24
GWF2_OD1_42_22, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(16726..18804)
DNA (2079bp) protein (693aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG id=3736516 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:KKS49495.1}; TaxID=1618627 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWF2_42_22.;"
13_1_40cm_3_scaffold_406_25
unknown

Not on your lists

18833..19672
DNA (840bp) protein (280aa)

This feature has no annotations

13_1_40cm_3_scaffold_406_26
unknown

Not on your lists

comp(19641..19859)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_3_scaffold_406_27
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19856..20578)
DNA (723bp) protein (241aa)
MntH manganese transporter protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4K4_9BRAD
MntH manganese transporter protein {ECO:0000313|EMBL:EFI52884.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS
hypothetical protein
13_1_40cm_3_scaffold_406_28
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20593..21396
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME77_RHOM4
Uncharacterized protein {ECO:0000313|EMBL:AKF09821.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
hypothetical protein
13_1_40cm_3_scaffold_406_29
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(21386..22216)
DNA (831bp) protein (277aa)
DegV family protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AU95_HERA2
DegV family protein Tax=RBG_16_Chloroflexi_68_14_curated
degV family protein
13_1_40cm_3_scaffold_406_30
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(22223..23866)
DNA (1644bp) protein (548aa)
DAK2 domain fusion protein YloV n=4 Tax=Dehalococcoides mccartyi RepID=D3SJK4_DEHSG
DAK2 domain fusion protein YloV; K07030 Tax=RBG_13_Chloroflexi_50_10_curated
dihydroxyacetone kinase
Displaying items 1-30 of 40 in total

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