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13_1_40cm_3_scaffold_5467

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5467_1
R_OP11_Daviesbacteria_44_29, Daviesbacteria, Microgenomates, Bacteria

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2..685
DNA (684bp) protein (228aa)
2-alkenal reductase (EC:1.3.1.74); K08070 2-alkenal reductase [EC:1.3.1.74] Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_44_29_curated
Peptidase S1 and S6 chymotrypsin/Hap (Fragment) n=1 Tax=Frankia sp. CN3 RepID=G6HPH3_9ACTO
trypsin-like serine protease with C-terminal PDZ domain
13_1_40cm_3_scaffold_5467_2
unknown

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comp(688..1101)
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_40cm_3_scaffold_5467_3
unknown

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comp(1462..1764)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_3_scaffold_5467_4

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2300..2953
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K376_DEHLB
Marine sediment metagenome DNA, contig: S06H3_S05002 {ECO:0000313|EMBL:GAI31494.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_40cm_3_scaffold_5467_5
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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3003..4610
DNA (1608bp) protein (536aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] id=14628780 bin=bin8_Chloro species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=CSP1_4_Chloroflexi
pyrG; CTP synthetase
13_1_40cm_3_scaffold_5467_6
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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4616..5584
DNA (969bp) protein (323aa)
Fructose-1,6-bisphosphatase n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L191_FRASN
glpX; fructose 1,6-bisphosphatase II
Tax=BJP_IG2158_Thermincola_46_17
13_1_40cm_3_scaffold_5467_7
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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5692..6576
DNA (885bp) protein (295aa)
Peptidase M50 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3Q2_SPHTD
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ACZ38869.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaero
13_1_40cm_3_scaffold_5467_8
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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6597..6806
DNA (210bp) protein (70aa)
50S ribosomal protein L31 n=5 Tax=Thermoanaerobacter RepID=RL31_THEP3
rpmE; 50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Therm
13_1_40cm_3_scaffold_5467_9
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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6912..7913
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I6L3_DESAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA60642.1}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviato
13_1_40cm_3_scaffold_5467_10
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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7913..8992
DNA (1080bp) protein (360aa)
Peptide chain release factor 1 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=RF1_MOOTA
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoa
13_1_40cm_3_scaffold_5467_11
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8989..9825
DNA (837bp) protein (279aa)
protein-(glutamine-N5) methyltransferase (EC:2.1.1.72)
Release factor glutamine methyltransferase n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B642_DESCC
Putative N(5)-glutamine methyltransferase PrmC {ECO:0000313|EMBL:AKF06220.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandarac
13_1_40cm_3_scaffold_5467_12
RLO_WOR_2_51_24, WOR-2, Bacteria

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9816..10397
DNA (582bp) protein (194aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LRA1_TEPAE
Sua5/YciO/YrdC/YwlC family protein
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
13_1_40cm_3_scaffold_5467_13
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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10467..10895
DNA (429bp) protein (143aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
serine hydroxymethyltransferase n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255BC29
glyA; serine hydroxymethyltransferase
13_1_40cm_3_scaffold_5467_14
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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10954..11703
DNA (750bp) protein (250aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
serine hydroxymethyltransferase n=1 Tax=Desulfurispora thermophila RepID=UPI0003784183
13_1_40cm_3_scaffold_5467_15
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11696..12814
DNA (1119bp) protein (373aa)
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y5E4_9FIRM
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase {ECO:0000313|EMBL:EHQ90394.1}; Flags: Precursor;; TaxID=768710 species="Bacteria; Firmicutes; Clostr
UDP-phosphate N-acetylglucosaminyltransferase
13_1_40cm_3_scaffold_5467_16
Segniliparus rugosus, Segniliparus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12829..13041
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Segniliparus rugosus ATCC BAA-974 RepID=E5XLJ1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFV14764.2}; TaxID=679197 species="Bacteria; Actinobacteria; Corynebacteriales; Segniliparaceae; Segniliparus.;" source="Segniliparus rugosus ATCC BAA-974.;"
13_1_40cm_3_scaffold_5467_17
unknown

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13053..13379
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_3_scaffold_5467_18
Gordonia sputi, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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13376..14089
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00037DCEC5
ATP synthase F0 subunit A
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
13_1_40cm_3_scaffold_5467_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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14100..14294
DNA (195bp) protein (65aa)
ATP synthase subunit c n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ64_PSEUX
ATP synthase subunit c
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocard
13_1_40cm_3_scaffold_5467_20
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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14291..14863
DNA (573bp) protein (191aa)
atpF; ATP synthase F0 subunit B (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7R4_9BACT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:
13_1_40cm_3_scaffold_5467_21
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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15011..15388
DNA (378bp) protein (126aa)
F0F1 ATP synthase subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=ATPD_ANAD2
ATP synthase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; S
Displaying 21 items

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