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13_1_40cm_3_scaffold_5940

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5940_1

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1..870
DNA (870bp) protein (290aa)
pyruvate dehydrogenase (acetyl-transferring) (EC:1.2.4.1)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) n=1 Tax=Frankia sp. EUN1f RepID=D3D6L0_9ACTO
Pyruvate dehydrogenase {ECO:0000313|EMBL:KGA21336.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
13_1_40cm_3_scaffold_5940_2
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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872..1849
DNA (978bp) protein (326aa)
Transketolase central region n=1 Tax=Frankia sp. EUN1f RepID=D3D6K9_9ACTO
Transketolase central region {ECO:0000313|EMBL:EFC81434.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
transketolase
13_1_40cm_3_scaffold_5940_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(1854..2804)
DNA (951bp) protein (317aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:EFH90074.1}; EC=4.3.1.12 {ECO:0000313|EMBL:EFH90074.1};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae;
ornithine cyclodeaminase/mu-crystallin (EC:4.3.1.12)
Ornithine cyclodeaminase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TD23_9CHLR rbh
13_1_40cm_3_scaffold_5940_4
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2901..4025
DNA (1125bp) protein (375aa)
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (EC:3.5.1.-)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WFX6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB98190.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
13_1_40cm_3_scaffold_5940_5
Bacillus okhensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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4519..5163
DNA (645bp) protein (215aa)
X-Pro dipeptidase n=1 Tax=Bacillus sp. L1(2012) RepID=UPI000346AEFF
X-Pro dipeptidase {ECO:0000313|EMBL:KHF38482.1}; TaxID=333138 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus okhensis.;"
Xaa-Pro aminopeptidase
13_1_40cm_3_scaffold_5940_6
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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5170..5901
DNA (732bp) protein (244aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SHS3_NOCSJ
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABL81358.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (s
13_1_40cm_3_scaffold_5940_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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5909..7141
DNA (1233bp) protein (411aa)
amine oxidase (EC:1.4.3.4); K00274 monoamine oxidase [EC:1.4.3.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003779FE5
amine oxidase
13_1_40cm_3_scaffold_5940_8
unknown

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7138..7317
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_3_scaffold_5940_9
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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7346..8452
DNA (1107bp) protein (369aa)
class V aminotransferase; K00830 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] Tax=RBG_16_Chloroflexi_54_18_curated
aminotransferase (EC:2.6.1.-)
Serine--pyruvate transaminase id=8265959 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
13_1_40cm_3_scaffold_5940_10
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(8442..9662)
DNA (1221bp) protein (407aa)
Catalytic domain of components of various dehydrogenase complexes n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDL1_THET1
catalytic domain of components of various dehydrogenase complexes
Catalytic domain of components of various dehydrogenase complexes {ECO:0000313|EMBL:ACZ41017.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 /
13_1_40cm_3_scaffold_5940_11
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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9757..10692
DNA (936bp) protein (312aa)
Luciferase-like monooxygenase superfamily n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2N8_THERP
luciferase-like monooxygenase superfamily protein
Luciferase-like monooxygenase superfamily {ECO:0000313|EMBL:ACM05642.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium
13_1_40cm_3_scaffold_5940_12
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10711..11880)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CUC4_SPHYA
Transposase {ECO:0000313|EMBL:KHF25183.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
integrase
13_1_40cm_3_scaffold_5940_13
unknown

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comp(12035..12133)
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 13 items

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