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13_1_40cm_3_scaffold_930_18

Organism: 13_1_40CM_3_Actinobacteria_66_19

partial RP 10 / 55 BSCG 12 / 51 ASCG 6 / 38 MC: 1
Location: comp(14877..15506)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor n=1 Tax=Frankia sp. BMG5.12 RepID=UPI0003704004 similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 198.0
  • Bit_score: 176
  • Evalue 3.50e-41
hypothetical protein Tax=CG_Delta_07 similarity UNIPROT
DB: UniProtKB
  • Identity: 44.2
  • Coverage: 206.0
  • Bit_score: 179
  • Evalue 5.90e-42
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 214.0
  • Bit_score: 165
  • Evalue 1.80e-38

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Taxonomy

CG_Delta_07 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
GTGCGCCGACAGCCGATTAGCGACGGCACCTCGTCCGAGCTCGACGCGCTCAAGCGCGGCGACGAAGCCGCCTTCGTCGACGTCCTCCAGCGCTATCACGGACCGCTGATGCGGCTCGCGATCGCTTACGTCCGCGACCGCCAGATCGCGGAGGACGTCGTGCAGGAGGCGTGGCTGACGGCCATCCGGACCCTGGCCCGTTTCGAAGGCCGCTCGTCCCTGAAGACCTGGATCTCCGGCATCGTGATCAACATCGCGCGCGCCAGAAGGCGCAAGGAATCACGCCTTCTGACCTTCACGTCCCTGCTCGGAGGTGACGACGCGGACCGCCGCAAGCACACAGTCGACCCATCGCGCTTCGGCAGTGACGGGACCTGGCGCGAGCTGCCCCACTCGTGGGAGAACGTCCCTGAGTCGACGTTGATCGGCAACGAGACGCTGACCAAGGTGAAGGCAGCGATCGAAGATCTGCCGCCCAAACACCGTGAGGTGATCGTCATGCGCGACGTGGCGCAGCTCGGCGCCGCCGAAGTGAGCCAGCTCCTGGGCATCTCGGCCGAGAATCAGCGGGTGCGCCTCCATCGGGCGCGTGCGGCTGTCCGTAAAGCCCTCGAGGACTACCTCGCATGA
PROTEIN sequence
Length: 210
VRRQPISDGTSSELDALKRGDEAAFVDVLQRYHGPLMRLAIAYVRDRQIAEDVVQEAWLTAIRTLARFEGRSSLKTWISGIVINIARARRRKESRLLTFTSLLGGDDADRRKHTVDPSRFGSDGTWRELPHSWENVPESTLIGNETLTKVKAAIEDLPPKHREVIVMRDVAQLGAAEVSQLLGISAENQRVRLHRARAAVRKALEDYLA*