ggKbase home page

13_1_40cm_3_scaffold_930

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_930_1
unknown

Not on your lists

comp(1..246)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_3_scaffold_930_2
unknown

Not on your lists

comp(307..402)
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_40cm_3_scaffold_930_3
unknown

Not on your lists

comp(462..686)
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_3_scaffold_930_4
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

850..3033
DNA (2184bp) protein (728aa)
dhkJ; hybrid signal transduction histidine kinase J (EC:2.7.13.3)
Hybrid signal transduction histidine kinase J {ECO:0000313|EMBL:AFR30252.1}; EC=2.7.13.3 {ECO:0000313|EMBL:AFR30252.1};; TaxID=1118963 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae;
Uncharacterized protein n=1 Tax=Arthrobacter sp. AK-YN10 RepID=U1YM83_9MICC
13_1_40cm_3_scaffold_930_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3033..3440
DNA (408bp) protein (136aa)
transcriptional regulator n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B6F672
response regulator; K07814 putative two-component system response regulator Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
response regulator receiver modulated metal dependent phosphohydrolase
13_1_40cm_3_scaffold_930_6
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3445..4329)
DNA (885bp) protein (295aa)
Polyamine ABC-transporter integral membrane protein n=1 Tax=Streptomyces collinus Tu 365 RepID=S5VAA9_STRCU
polyamine ABC-transporter integral membrane protein
Polyamine ABC-transporter integral membrane protein {ECO:0000313|EMBL:AGS67452.1}; TaxID=1214242 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Strepto
13_1_40cm_3_scaffold_930_7
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4326..5222)
DNA (897bp) protein (299aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y7R5_THEBD
binding-protein-dependent transporter inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADG87734.1}; Flags: Precursor;; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Th
13_1_40cm_3_scaffold_930_8
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5230..6507)
DNA (1278bp) protein (426aa)
Extracellular solute-binding protein family 1 n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J283_FRASU rbh
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADP78121.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
13_1_40cm_3_scaffold_930_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(6518..7714)
DNA (1197bp) protein (399aa)
Spermidine/putrescine ABC transporter ATPase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XXU7_9PROT
potA; polyamine transport ATP-binding protein potA Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
potA; polyamine transport ATP-binding protein potA
13_1_40cm_3_scaffold_930_10
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7765..9153
DNA (1389bp) protein (463aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Putative glutamate-1-semialdehyde aminotransferase (Aminomutase), PLP-dependent {ECO:0000313|EMBL:CAJ64648.1}; EC=5.4.3.8 {ECO:0000313|EMBL:CAJ64648.1};; TaxID=326424 species="Bacteria; Actinobacteria
Putative glutamate-1-semialdehyde aminotransferase (Aminomutase), PLP-dependent n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RD26_FRAAA
13_1_40cm_3_scaffold_930_11
actinobacterium acAMD-2, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9176..10162
DNA (987bp) protein (329aa)
agmatinase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B61452 rbh
Agmatinase {ECO:0000313|EMBL:KGA11497.1}; TaxID=1504318 species="Bacteria; Actinobacteria.;" source="actinobacterium acAMD-2.;"
agmatinase
13_1_40cm_3_scaffold_930_12
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10159..10992)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00035E249C
N5,N10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:KIH97589.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Stre
oxidoreductase
13_1_40cm_3_scaffold_930_13

Not on your lists

comp(11015..11641)
DNA (627bp) protein (209aa)
Diguanylate cyclase and metal dependent phosphohydrolase n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1D2_DEHLB
Marine sediment metagenome DNA, contig: S01H1_L07478 {ECO:0000313|EMBL:GAF72710.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
diguanylate cyclase and metal dependent phosphohydrolase
13_1_40cm_3_scaffold_930_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(11769..12038)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TXN8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH83085.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_40cm_3_scaffold_930_15
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(12040..12792)
DNA (753bp) protein (251aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C720_SPHTD
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ACZ37781.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteracea
13_1_40cm_3_scaffold_930_16
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(12762..13367)
DNA (606bp) protein (202aa)
Oxidoreductase molybdopterin binding protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C719_SPHTD
oxidoreductase molybdopterin binding protein
Oxidoreductase molybdopterin binding protein {ECO:0000313|EMBL:ACZ37780.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; S
13_1_40cm_3_scaffold_930_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(14644..14880)
DNA (237bp) protein (79aa)
Putative transmembrane anti-sigma factor n=1 Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1T369_MYCVP
putative transmembrane anti-sigma factor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
putative transmembrane anti-sigma factor
13_1_40cm_3_scaffold_930_18
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14877..15506)
DNA (630bp) protein (210aa)
RNA polymerase sigma24 factor n=1 Tax=Frankia sp. BMG5.12 RepID=UPI0003704004
hypothetical protein Tax=CG_Delta_07
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_3_scaffold_930_19
unknown

Not on your lists

comp(15572..15841)
DNA (270bp) protein (90aa)

This feature has no annotations

Displaying 19 items

View Taxonomy