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13_1_40cm_3_scaffold_2126

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2126_1
unknown

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comp(3..374)
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_40cm_3_scaffold_2126_2
unknown

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comp(387..941)
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_40cm_3_scaffold_2126_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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949..3705
DNA (2757bp) protein (919aa)
Alpha-galactosidase-like protein; K07407 alpha-galactosidase [EC:3.2.1.22] Tax=GWC2_Gemmatimonadetes_71_10_curated
Alpha-galactosidase-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZD0_9EURY
Alpha-galactosidase-like protein
13_1_40cm_3_scaffold_2126_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3702..4514)
DNA (813bp) protein (271aa)
binding-protein-dependent transporters inner membrane component; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC-type sugar transport system, permease component id=4522148 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
sugar ABC transporter permease
13_1_40cm_3_scaffold_2126_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(4498..6339)
DNA (1842bp) protein (614aa)
sugar ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Permease component of ABC-type sugar transporter id=4522138 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
sugar ABC transporter permease
13_1_40cm_3_scaffold_2126_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6336..7400)
DNA (1065bp) protein (355aa)
ABC transporter related protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSY5_PSEUU
ABC transporter related protein {ECO:0000313|EMBL:ADV27141.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseu
ugpC; glycerol-3-phosphate transporter ATP-binding subunit
13_1_40cm_3_scaffold_2126_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7413..8105)
DNA (693bp) protein (231aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein SclubSA_04243 id=2073410 bin=GWD2_Deltaproteobacteria_55_8 species=SAR324 cluster bacterium SCGC AAA001-C10 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_3_scaffold_2126_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8215..8874
DNA (660bp) protein (220aa)
sodA; Superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Superoxide dismutase n=1 Tax=Anoxybacillus sp. DT3-1 RepID=M5R7E5_9BACI
sodA; Superoxide dismutase
13_1_40cm_3_scaffold_2126_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8886..9308)
DNA (423bp) protein (141aa)
Response regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F147_SORC5
response regulator
Response regulator {ECO:0000313|EMBL:CAN91331.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulo
13_1_40cm_3_scaffold_2126_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9380..9565)
DNA (186bp) protein (62aa)
Cysteine-rich CPXCG protein
Cysteine-rich CPXCG protein {ECO:0000313|EMBL:AHG91532.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_2126_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(9584..10114)
DNA (531bp) protein (177aa)
DinB superfamily {ECO:0000313|EMBL:CDM66153.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
DinB-like domain protein
Putative metal-dependent hydrolase yfiT id=2225161 bin=GWA2_Ignavibacteria_55_11 species=Deinococcus peraridilitoris genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
13_1_40cm_3_scaffold_2126_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10111..10713)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A825_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38385.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_3_scaffold_2126_13
unknown

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comp(10772..10855)
DNA (84bp) protein (28aa)

This feature has no annotations

13_1_40cm_3_scaffold_2126_trna_1
unknown

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comp(10783..10855)
DNA (73bp)
transferRNA
Displaying 14 items

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