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13_1_40cm_3_scaffold_1907

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1907_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1..360
DNA (360bp) protein (120aa)
RNA polymerase n=1 Tax=Paenibacillus elgii RepID=UPI000248DF4F
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Gemmatimonadetes_71_10_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_3_scaffold_1907_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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357..911
DNA (555bp) protein (185aa)
putative glycosyl hydrolase, family 13 (EC:2.4.1.-)
Glycoside hydrolase, family 13-like protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IFZ5_ANADE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_1907_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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969..1553
DNA (585bp) protein (195aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_1907_4
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1649..3916
DNA (2268bp) protein (756aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:S
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6EB3C
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
13_1_40cm_3_scaffold_1907_5
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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3985..4590
DNA (606bp) protein (202aa)
Nitrogen fixation protein NifU n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR6_9BACT
Nfu/NifU-domain containing protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
thioredoxin-like protein
13_1_40cm_3_scaffold_1907_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4662..5825
DNA (1164bp) protein (388aa)
Biotin carboxylase-like protein id=4290030 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
biotin carboxylase-like Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_3_scaffold_1907_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5855..7048
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK36_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63411.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
13_1_40cm_3_scaffold_1907_8
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(6993..7820)
DNA (828bp) protein (276aa)
type 11 methyltransferase Tax=RBG_16_Armatimonadetes_67_12_curated
type 11 methyltransferase id=24550730 bin=RBG_19FT_COMBO_GAL15_69_19 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
type 11 methyltransferase
13_1_40cm_3_scaffold_1907_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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comp(7817..8476)
DNA (660bp) protein (220aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_40cm_3_scaffold_1907_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8538..9029)
DNA (492bp) protein (164aa)
Transcription elongation factor GreA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM5_GEMAT
transcription elongation factor GreA/GreB domain-containing protein
Transcription elongation factor GreA/GreB domain-containing protein {ECO:0000313|EMBL:AHG87594.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1907_11
unknown

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9102..9740
DNA (639bp) protein (213aa)

This feature has no annotations

13_1_40cm_3_scaffold_1907_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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9791..10576
DNA (786bp) protein (262aa)
chromosome partitioning ATPase; K03593 ATP-binding protein involved in chromosome partitioning id=14626562 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
chromosome partitioning ATPase; K03593 ATP-binding protein involved in chromosome partitioning Tax=CSP1_6_Rokubacteria
mrp; putative ATPase
13_1_40cm_3_scaffold_1907_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10573..10965
DNA (393bp) protein (131aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627168 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_3_scaffold_1907_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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10965..12596
DNA (1632bp) protein (544aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
Displaying 14 items

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