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13_1_40cm_3_scaffold_2553

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2553_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..1701)
DNA (1701bp) protein (567aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003692E5E
LVIVD repeat-containing protein
LVIVD repeat-containing protein {ECO:0000313|EMBL:AHG91658.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_2553_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(1839..2279)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003757CC5
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
protein of unknown function DUF305
13_1_40cm_3_scaffold_2553_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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2615..3700
DNA (1086bp) protein (362aa)
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ATP-dependent DNA ligase-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX07_RAMTT
ATP-dependent DNA ligase
13_1_40cm_3_scaffold_2553_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(3660..4916)
DNA (1257bp) protein (419aa)
Eukaryotic-type DNA primase-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWZ9_RAMTT
eukaryotic-type DNA primase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
eukaryotic-type DNA primase
13_1_40cm_3_scaffold_2553_5
RLO_RIF05_58_11, RIF5, Bacteria

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5047..5916
DNA (870bp) protein (290aa)
2-heptaprenyl-1,4-naphthoquinone methyltransferase n=1 Tax=Streptomyces sp. C RepID=D9VQD3_9ACTO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
ubiquinone biosynthesis methyltransferase UbiE
13_1_40cm_3_scaffold_2553_6

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5913..7178
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Salinimonas chungwhensis RepID=UPI00036DE653
Uncharacterized protein {ECO:0000313|EMBL:KKM84707.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
group 1 glycosyl transferase
13_1_40cm_3_scaffold_2553_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7245..8870)
DNA (1626bp) protein (542aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NG10_ROSCS
regulator of chromosome condensation, RCC1 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
regulator of chromosome condensation RCC1
13_1_40cm_3_scaffold_2553_8
unknown

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comp(9086..9475)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_3_scaffold_2553_9
unknown

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comp(9494..10096)
DNA (603bp) protein (201aa)

This feature has no annotations

13_1_40cm_3_scaffold_2553_10
unknown

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comp(10106..10660)
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_40cm_3_scaffold_2553_11
unknown

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comp(10848..11048)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_3_scaffold_2553_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(11114..12226)
DNA (1113bp) protein (371aa)
alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Alanine dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X9_GEMAT
alanine dehydrogenase
13_1_40cm_3_scaffold_2553_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(12223..13377)
DNA (1155bp) protein (385aa)
Putative S16B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y0_GEMAT
putative S16B family peptidase Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase M16 domain protein
13_1_40cm_3_scaffold_2553_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(13521..13694)
DNA (174bp) protein (58aa)
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RBG_16_Gemmatimonadetes_66_8_curated
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] id=5093888 bin=PER_GWE2_39_6 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
Polyribonucleotide nucleotidyltransferase
Displaying 14 items

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