ggKbase home page

13_1_40cm_3_scaffold_3041

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3041_1
unknown

Not on your lists

2..145
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_3_scaffold_3041_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(322..1650)
DNA (1329bp) protein (443aa)
O-antigen polymerase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5U7_GEMAT
O-antigen polymerase family protein
O-antigen polymerase family protein {ECO:0000313|EMBL:BAH37607.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiac
13_1_40cm_3_scaffold_3041_3
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1844..2965
DNA (1122bp) protein (374aa)
Glycosyl transferase group 1 n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2W2_GEODF
Uncharacterized protein {ECO:0000313|EMBL:KJS03125.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
group 1 glycosyl transferase
13_1_40cm_3_scaffold_3041_4
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2962..4173
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035CA889
glycosyl transferase
Glycosyl transferase family protein {ECO:0000313|EMBL:ACL73446.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source
13_1_40cm_3_scaffold_3041_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4133..4822)
DNA (690bp) protein (230aa)
putative glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase {ECO:0000313|EMBL:BAH37627.1}; EC=2.4.-.- {ECO:0000313|EMBL:BAH37627.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimon
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W7_GEMAT
13_1_40cm_3_scaffold_3041_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5053..7347
DNA (2295bp) protein (765aa)
Putative exopolysaccharide biosynthesis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W1_GEMAT
putative exopolysaccharide biosynthesis protein
Putative exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:BAH37621.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimon
13_1_40cm_3_scaffold_3041_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7364..8005
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W2_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_3041_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8292..10178
DNA (1887bp) protein (629aa)
TonB-dependent receptor n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GU57_THISH
Uncharacterized protein {ECO:0000313|EMBL:ETX00812.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
TonB-dependent receptor
13_1_40cm_3_scaffold_3041_9
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10204..10806
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DNN5_9BACL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EED08295.1}; Flags: Precursor;; TaxID=543302 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobaci
13_1_40cm_3_scaffold_3041_10
unknown

Not on your lists

comp(10775..10915)
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_40cm_3_scaffold_3041_11
RLO_Nitrospinae_47_7, Nitrospirae, Bacteria

Not on your lists

11224..12309
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II53_KORVE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_47_7_curated
hypothetical protein
13_1_40cm_3_scaffold_3041_12
unknown

Not on your lists

12319..12861
DNA (543bp) protein (181aa)

This feature has no annotations

13_1_40cm_3_scaffold_3041_13
unknown

Not on your lists

12858..13406
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_40cm_3_scaffold_3041_14
R_OD1_Falkowbacteria_46_11b, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(13391..14191)
DNA (801bp) protein (267aa)
phosphoribosylglycinamide synthetase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RIFCSPLOWO2_02_FULL_OD1_Falkowbacteria_46_11b_curated
phosphoribosylamine-glycine ligase (EC:6.3.4.13)
Phosphoribosylamine/glycine ligase id=5800450 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
13_1_40cm_3_scaffold_3041_15
unknown

Not on your lists

15110..15223
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying 15 items

View Taxonomy