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13_1_40cm_3_scaffold_3104

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3104_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(79..2859)
DNA (2781bp) protein (927aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_3104_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3079..3255
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=1 Tax=Spirulina subsalsa RepID=UPI00031AFC34
30S ribosomal protein S21 Tax=RBG_16_Gemmatimonadetes_66_8_curated
30S ribosomal protein S21
13_1_40cm_3_scaffold_3104_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3269..3478
DNA (210bp) protein (70aa)
Cold shock protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Q1_GEMAT
Cold-shock protein DNA-binding protein
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:AHG89448.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_3104_4
unknown

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comp(3536..3724)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_3_scaffold_3104_5
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3904..4587
DNA (684bp) protein (228aa)
two component LuxR family transcriptional regulator Tax=RBG_13_Ignavibacteria_36_8_curated
two-component system response regulator id=717628 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
LuxR family transcriptional regulator
13_1_40cm_3_scaffold_3104_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4594..5169)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B1_GEMAT
LemA family protein
LemA family protein {ECO:0000313|EMBL:AHG90182.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_3104_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5166..5831)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B0_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_3104_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5834..6619)
DNA (786bp) protein (262aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6A9_GEMAT
hypothetical membrane protein; K06872 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF477
13_1_40cm_3_scaffold_3104_9
unknown

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6718..6909
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_3_scaffold_3104_10

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7054..7668
DNA (615bp) protein (205aa)
phosphoesterase PA-phosphatase-like protein id=1251117 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:EQB63980.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
phosphoesterase PA-phosphatase related protein
13_1_40cm_3_scaffold_3104_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7684..7950)
DNA (267bp) protein (89aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_3104_12
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(8042..8167)
DNA (126bp) protein (42aa)
sodium:dicarboxylate symporter; K11102 proton glutamate symport protein Tax=GWE2_Bacteroidetes_42_39_curated
13_1_40cm_3_scaffold_3104_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8167..8874)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000363B281
gltP; glutamate-aspartate carrier protein
Glutamate-aspartate carrier protein {ECO:0000313|EMBL:BAH39047.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiac
Displaying 13 items

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