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13_1_40cm_3_scaffold_3309

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3309_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3..866)
DNA (864bp) protein (288aa)
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AHG89498.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_3309_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(902..2149)
DNA (1248bp) protein (416aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTE2_9FIRM
ATP-binding region ATPase domain protein
13_1_40cm_3_scaffold_3309_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2146..2823)
DNA (678bp) protein (226aa)
Two-component response regulator CopR n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AXF4_PSERE
transcriptional regulator domain-containing protein
Transcriptional regulator domain-containing protein {ECO:0000313|EMBL:AHG89496.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_3309_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2917..3939
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035F6A5A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89504.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_3309_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(3947..5194)
DNA (1248bp) protein (416aa)
Possible aminopeptidase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBI4_9SPHI
peptidase M28 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative aminopeptidase
13_1_40cm_3_scaffold_3309_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(5548..6981)
DNA (1434bp) protein (478aa)
GF13555 gene product from transcript GF13555-RA Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PEGA domain protein id=24407688 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
OmpA/MotB domain-containing protein
13_1_40cm_3_scaffold_3309_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7184..7987
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L5_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_3309_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7984..9741
DNA (1758bp) protein (586aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L4_GEMAT
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
double-transmembrane region domain protein
13_1_40cm_3_scaffold_3309_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9741..13061
DNA (3321bp) protein (1107aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=861299 species="Bacteria; Ge
Transcription-repair-coupling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L3_GEMAT
transcription-repair coupling factor
Displaying 9 items

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