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13_1_40cm_3_scaffold_3684

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3684_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1..330
DNA (330bp) protein (110aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J9_GEMAT
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_1_40cm_3_scaffold_3684_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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754..1776
DNA (1023bp) protein (341aa)
Aldehyde dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K0_GEMAT
Aldehyde Dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:AHG90457.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_3684_3
R_OD1_Uhrbacteria_51_9, Uhrbacteria, Parcubacteria, Bacteria

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1988..2893
DNA (906bp) protein (302aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_51_9_curated
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SS04_9BACT
13_1_40cm_3_scaffold_3684_4
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2890..4146
DNA (1257bp) protein (419aa)
Threonine synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGE0_ANADF
threonine synthase
Threonine synthase {ECO:0000313|EMBL:ABS27786.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source
13_1_40cm_3_scaffold_3684_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4143..5087
DNA (945bp) protein (315aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
thrB; homoserine kinase ThrB (EC:2.7.1.39) id=14631961 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
Homoserine kinase
13_1_40cm_3_scaffold_3684_6
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5084..5359
DNA (276bp) protein (92aa)
ThiamineS protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGE1_ANADF
sulfur transfer protein ThiS
ThiamineS protein {ECO:0000313|EMBL:ABS27787.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source=
13_1_40cm_3_scaffold_3684_7
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5363..6511
DNA (1149bp) protein (383aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCF4_ANASK rbh
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ACG74790.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaerom
13_1_40cm_3_scaffold_3684_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6966..7610
DNA (645bp) protein (215aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Signal peptidase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC84_GEMAT
signal peptidase I
13_1_40cm_3_scaffold_3684_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7644..8450
DNA (807bp) protein (269aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K2_GEMAT
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_3_scaffold_3684_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8478..8981
DNA (504bp) protein (168aa)
hypothetical protein; K09767 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0234 protein yajQ
hypothetical protein; K09767 hypothetical protein id=12555050 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_3684_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8978..10297
DNA (1320bp) protein (440aa)
hypothetical protein; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K6_GEMAT
Ribosomal protein S12 methylthiotransferase rimO
13_1_40cm_3_scaffold_3684_12
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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10294..11586
DNA (1293bp) protein (431aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PPP6_9FIRM
13_1_40cm_3_scaffold_3684_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11555..12301
DNA (747bp) protein (249aa)
hypothetical protein; K06381 stage II sporulation protein D Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
SpoIID/LytB domain-containing protein; K06381 stage II sporulation protein D id=17250210 bin=RBG_16_Aminicenantes_66_30 tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
spoIID; stage II sporulation protein D
Displaying 13 items

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