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13_1_40cm_3_scaffold_3686

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3686_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..683)
DNA (681bp) protein (227aa)
gcdH; glutaryl-CoA dehydrogenase (EC:1.3.99.7); K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glutaryl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA7_GEMAT
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_3_scaffold_3686_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(683..1555)
DNA (873bp) protein (291aa)
Metallophosphoesterase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZR5_RUBXD
metallophosphoesterase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Calcineurin-like phosphoesterase superfamily domain protein
13_1_40cm_3_scaffold_3686_3
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1552..2970)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HJ83_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV30453.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirill
hypothetical protein
13_1_40cm_3_scaffold_3686_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2967..3284)
DNA (318bp) protein (106aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_3686_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3232..4254)
DNA (1023bp) protein (341aa)
icd; isocitrate dehydrogenase (EC:1.1.1.42); K00030 isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
icd1; isocitrate dehydrogenase (EC:1.1.1.41)
Isocitrate dehydrogenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G817_SORC5 rbh
13_1_40cm_3_scaffold_3686_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4251..4859)
DNA (609bp) protein (203aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_3686_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4918..5652)
DNA (735bp) protein (245aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L710_9BACT
short-chain dehydrogenase/reductase SDR
13_1_40cm_3_scaffold_3686_8
unknown

Not on your lists

comp(5823..6149)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Rhodococcus sp. 114MFTsu3.1 RepID=UPI0003604B1E
13_1_40cm_3_scaffold_3686_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6209..6616)
DNA (408bp) protein (136aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_3686_10
unknown

Not on your lists

6647..7657
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A8E05
13_1_40cm_3_scaffold_3686_11
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

7965..8810
DNA (846bp) protein (282aa)
serine/threonine protein kinase (EC:2.7.11.18); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RBG_16_Planctomycetes_55_9_curated
OmpA/MotB domain protein n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L6Y7_SAPGL
OmpA/MotB domain-containing protein
13_1_40cm_3_scaffold_3686_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8907..10526)
DNA (1620bp) protein (540aa)
Probable potassium transport system protein kup n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=KUP_MYXXD
kup; potassium uptake protein; K03549 KUP system potassium uptake protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
kup; potassium uptake protein
13_1_40cm_3_scaffold_3686_13
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10552..10803)
DNA (252bp) protein (84aa)
Probable potassium transport system protein kup n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YTK3_9CHLB
potassium transporter protein; K03549 KUP system potassium uptake protein Tax=CG_Delta_06
K potassium transporter
13_1_40cm_3_scaffold_3686_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10800..11987)
DNA (1188bp) protein (396aa)
Major facilitator family transporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
Membrane protein, major facilitator superfamily id=4683444 bin=GWC2_Nitrospirae_57_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
major facilitator superfamily MFS_1
13_1_40cm_3_scaffold_3686_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11980..13593)
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A7Y2_NATTJ
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_3686_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13590..14822)
DNA (1233bp) protein (411aa)
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 id=5224560 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
2-isopropylmalate synthase Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_3686_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14911..16113
DNA (1203bp) protein (401aa)
peptidase M20 n=1 Tax=Spirosoma spitsbergense RepID=UPI000379FA4E
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:AHG91478.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_3686_18
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16121..17233)
DNA (1113bp) protein (371aa)
Metallophosphoesterase n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WGR8_BURSC
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ADG17663.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (s
13_1_40cm_3_scaffold_3686_19
Pseudanabaena sp. PCC 7367, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17230..17694)
DNA (465bp) protein (155aa)
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin {ECO:0000313|EMBL:AFY69970.1}; EC=1.11.1.15 {ECO:0000313|EMBL:AFY69970.1};; TaxID=82654 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source=
Peroxiredoxin n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SIJ9_9CYAN
13_1_40cm_3_scaffold_3686_20
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17691..18050)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00036693AC
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ADW13963.1}; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" so
Displaying 20 items

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