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13_1_40cm_3_scaffold_385

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_385_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2..934
DNA (933bp) protein (311aa)
Polysaccharide export protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWK1_9BACT
polysaccharide export protein
Polysaccharide export protein {ECO:0000313|EMBL:AHG91016.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_385_2
Desulfovibrio alaskensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1040..2050)
DNA (1011bp) protein (337aa)
UDP-N-acetylglucosamine 4-epimerase {ECO:0000313|EMBL:ABB36834.2}; EC=5.1.3.12 {ECO:0000313|EMBL:ABB36834.2};; TaxID=207559 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales;
UDP-N-acetylglucosamine 4-epimerase n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q317P2_DESDG
UDP-N-acetylglucosamine 4-epimerase
13_1_40cm_3_scaffold_385_3
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2093..2842)
DNA (750bp) protein (250aa)
Methyltransferase type 11 n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K9W7_NITWC
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ADJ29325.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watson
13_1_40cm_3_scaffold_385_4
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2852..4138)
DNA (1287bp) protein (429aa)
Glycosyl transferase group 1 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDL2_ANADF
group 1 glycosyl transferase Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
group 1 glycosyl transferase
13_1_40cm_3_scaffold_385_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4135..5988)
DNA (1854bp) protein (618aa)
Asparagine synthase, glutamine-hydrolyzing {ECO:0000313|EMBL:CDM65097.1}; EC=6.3.5.4 {ECO:0000313|EMBL:CDM65097.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinom
Asparagine synthetase id=4839529 bin=GWC2_Elusimicrobia_51_8 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
asparagine synthase
13_1_40cm_3_scaffold_385_6
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6054..7565)
DNA (1512bp) protein (504aa)
Integral membrane protein MviN n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QCE2_9FIRM
integral membrane protein MviN
Integral membrane protein MviN {ECO:0000313|EMBL:EKP94176.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" sourc
13_1_40cm_3_scaffold_385_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7692..8732)
DNA (1041bp) protein (347aa)
lipopolysaccharide biosynthesis protein
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AHG88394.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Lipopolysaccharide biosynthesis protein id=3710614 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
13_1_40cm_3_scaffold_385_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8767..10002)
DNA (1236bp) protein (412aa)
cps2I; glycosyl transferase, group 1 family protein (EC:2.4.1.-)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000380616A
group 1 glycosyl transferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_385_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9999..11225)
DNA (1227bp) protein (409aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC94631.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
Glycosyl transferase group 1 id=2278733 bin=GWA2_Elusimicrobia_69_24 species=Methylobacterium extorquens genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
group 1 glycosyl transferase
13_1_40cm_3_scaffold_385_10
unknown

Not on your lists

comp(11261..12619)
DNA (1359bp) protein (453aa)

This feature has no annotations

13_1_40cm_3_scaffold_385_11
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(12628..13668)
DNA (1041bp) protein (347aa)
Glycosyl transferase, group 1 n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4V5_THERP
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ACM07000.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (stra
13_1_40cm_3_scaffold_385_12
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13846..16194)
DNA (2349bp) protein (783aa)
von Willebrand factor type D domain protein {ECO:0000313|EMBL:KFE69384.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalan
13_1_40cm_3_scaffold_385_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(16578..17912)
DNA (1335bp) protein (445aa)
UDP-phosphate glucose phosphotransferase (EC:2.7.8.-) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QKL6_9CYAN
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
13_1_40cm_3_scaffold_385_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

18528..18749
DNA (222bp) protein (74aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_3_scaffold_385_15
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18915..20105
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Agrococcus pavilionensis RepID=UPI0003909A97
VanZ family protein {ECO:0000313|EMBL:KDA04883.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
13_1_40cm_3_scaffold_385_16
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20160..21269)
DNA (1110bp) protein (370aa)
glucose/sorbosone dehydrogenase (EC:1.1.5.-)
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:AEI79307.1}; EC=1.1.5.- {ECO:0000313|EMBL:AEI79307.1};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkhold
Glucose/sorbosone dehydrogenase n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GPM5_CUPNN
13_1_40cm_3_scaffold_385_17
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(21271..22437)
DNA (1167bp) protein (389aa)
h16_A1828; glucose/sorbosone dehydrogenase (EC:1.1.1.-)
hypothetical protein id=24459545 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin rbh
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
13_1_40cm_3_scaffold_385_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(22448..23647)
DNA (1200bp) protein (400aa)
glucose/sorbosone dehydrogenase (EC:1.1.5.-)
hypothetical protein id=24459545 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
13_1_40cm_3_scaffold_385_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23644..24849)
DNA (1206bp) protein (402aa)
GTPase HflX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C4_GEMAT rbh
GTP-binding protein, HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708
13_1_40cm_3_scaffold_385_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24960..25454)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C5_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Late embryogenesis abundant protein 2
13_1_40cm_3_scaffold_385_21
unknown

Not on your lists

25464..26315
DNA (852bp) protein (284aa)
winged helix family two component transcriptional regulator
13_1_40cm_3_scaffold_385_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26312..27562)
DNA (1251bp) protein (417aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5V9_GEMAT
ATP-binding region ATPase domain protein
13_1_40cm_3_scaffold_385_23
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(27632..28270)
DNA (639bp) protein (213aa)
two component LuxR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
two component LuxR family transcriptional regulator id=14430684 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
LuxR family transcriptional regulator
13_1_40cm_3_scaffold_385_24
unknown

Not on your lists

comp(28337..28528)
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_3_scaffold_385_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

28874..29905
DNA (1032bp) protein (344aa)
NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W0_GEMAT
NtrC family two-component response regulator Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
NtrC family two-component response regulator
13_1_40cm_3_scaffold_385_26
unknown

Not on your lists

comp(29794..30093)
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_3_scaffold_385_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(30387..31604)
DNA (1218bp) protein (406aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Putative sensor histidine kinase with a response regulator receiver domain and a phosphotransferase (HPt) domain n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TGY0_9BRAD
ATP-binding region ATPase domain protein
13_1_40cm_3_scaffold_385_28
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

31915..32829
DNA (915bp) protein (305aa)
Putative Response regulator receiver modulated diguanylate cyclase n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G238_9CYAN
Putative Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:CBN56678.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" s
response regulator/GGDEF domain-containing protein
13_1_40cm_3_scaffold_385_29
RLO_PLX_64_10, Bacteria

Not on your lists

32954..34225
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI0003644AC0
dimethylaniline monooxygenase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
dimethylaniline monooxygenase
13_1_40cm_3_scaffold_385_30
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34206..35432
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6WZV0_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:ENO14308.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanh
hypothetical protein
Displaying items 1-30 of 33 in total

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