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13_1_40cm_3_scaffold_377

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_377_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..729)
DNA (729bp) protein (243aa)
Metal dependent phosphohydrolase with GAF sensor n=1 Tax=Geobacter sp. (strain M18) RepID=E8WRH4_GEOS8
putative phosphatase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein phosphatase 2C domain protein
13_1_40cm_3_scaffold_377_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(816..1190)
DNA (375bp) protein (125aa)
Serine-protein kinase rsbW n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NXF5_9BACT
response regulator receiver protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
anti-sigma regulatory factor, serine/threonine protein kinase
13_1_40cm_3_scaffold_377_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1220..1519)
DNA (300bp) protein (100aa)
Anti-sigma factor antagonist n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A2_GEMAT
putative anti sigma factor antagonist Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
anti-anti-sigma factor
13_1_40cm_3_scaffold_377_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1526..2437)
DNA (912bp) protein (304aa)
pta; phosphate acetyltransferase (EC:2.3.1.8); K00625 phosphate acetyltransferase [EC:2.3.1.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phosphate acetyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A3_GEMAT
phosphate acetyl/butaryl transferase
13_1_40cm_3_scaffold_377_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2434..2913)
DNA (480bp) protein (160aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A4_GEMAT
13_1_40cm_3_scaffold_377_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2910..3431)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A5_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_377_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3400..4242)
DNA (843bp) protein (281aa)
recJ; single-stranded-DNA-specific exonuclease (EC:3.1.-.-); K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
recJ; single-stranded-DNA-specific exonuclease (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A6_GEMAT
13_1_40cm_3_scaffold_377_8
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4436..4900
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain 1710b) RepID=Q3JQP7_BURP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA50751.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source
13_1_40cm_3_scaffold_377_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5065..5553)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A7_GEMAT
hypothetical protein; K07164 Tax=GWC2_Gemmatimonadetes_71_10_curated
protein of unknown function DUF164
13_1_40cm_3_scaffold_377_10
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6508..7509
DNA (1002bp) protein (334aa)
Uncharacterised protein {ECO:0000313|EMBL:CRD99616.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
13_1_40cm_3_scaffold_377_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(7693..9501)
DNA (1809bp) protein (603aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=861299 species="Bacteria; Gemma
Endonuclease MutS2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=MUTS2_GEMAT
MutS2 protein
13_1_40cm_3_scaffold_377_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9498..9959)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4B0_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38935.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_3_scaffold_377_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(9960..10148)
DNA (189bp) protein (63aa)
30S ribosomal protein S21 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS21_GEMAT
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 Tax=GWC2_Gemmatimonadetes_71_10_curated
rpsU; 30S ribosomal protein S21
13_1_40cm_3_scaffold_377_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10214..10552)
DNA (339bp) protein (113aa)
HIT family hydrolase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036B92DF
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
histidine triad (HIT) protein
13_1_40cm_3_scaffold_377_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10549..11061)
DNA (513bp) protein (171aa)
Chaperone protein DnaJ n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4B5_GEMAT
dnaJ; chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=GWC2_Gemmatimonadetes_71_10_curated
dnaJ; chaperone protein DnaJ
13_1_40cm_3_scaffold_377_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11058..11687)
DNA (630bp) protein (210aa)
Chaperone protein DnaJ n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XPS9_9BACT id=5224220 bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
dnaJ; chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Chaperone protein dnaJ
13_1_40cm_3_scaffold_377_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11688..12716)
DNA (1029bp) protein (343aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4B6_GEMAT
hrcA; heat-inducible transcription repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gem
13_1_40cm_3_scaffold_377_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12713..13870)
DNA (1158bp) protein (386aa)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4B7_GEMAT
oxygen-independent coproporphyrinogen III oxidase
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:AHG91007.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_377_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13889..14995)
DNA (1107bp) protein (369aa)
DNA protecting protein DprA n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKF5_RHOM4
DNA protecting protein DprA
DNA protecting protein DprA {ECO:0000313|EMBL:ACY48867.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
13_1_40cm_3_scaffold_377_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14974..15948)
DNA (975bp) protein (325aa)
GTPase Obg n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4B9_GEMAT rbh
obg; GTP-binding protein
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatim
13_1_40cm_3_scaffold_377_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16058..16717)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C0_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Carboxymuconolactone decarboxylase
13_1_40cm_3_scaffold_377_22
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16737..17771)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MP59_CORCM
Uncharacterized protein {ECO:0000313|EMBL:KFE60123.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
hypothetical protein
13_1_40cm_3_scaffold_377_23
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

17833..19422
DNA (1590bp) protein (530aa)
Tax=BJP_IG2158_Zixibacteria_48_33
13_1_40cm_3_scaffold_377_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

19422..20450
DNA (1029bp) protein (343aa)
rfaE; D-beta-D-heptose 7-phosphate kinase (EC:2.7.1.-); K03272 D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] Tax=GWC2_Gemmatimonadetes_
D-beta-D-heptose 7-phosphate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C3_GEMAT
PfkB domain protein
13_1_40cm_3_scaffold_377_25
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20462..23299)
DNA (2838bp) protein (946aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000362556A
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AEV33492.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenwe
13_1_40cm_3_scaffold_377_26
unknown

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23442..23876
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_40cm_3_scaffold_377_trna_2
unknown

Not on your lists

comp(24649..24721)
DNA (73bp)
transferRNA
13_1_40cm_3_scaffold_377_27

Not on your lists

24807..27149
DNA (2343bp) protein (781aa)
PREDICTED: ankyrin-1-like n=1 Tax=Amphimedon queenslandica RepID=UPI00021A5C03
Uncharacterized protein {ECO:0000313|EMBL:KKM06684.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
WD repeat-containing protein
13_1_40cm_3_scaffold_377_trna_1
unknown

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27177..27250
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_377_28
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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27241..28365
DNA (1125bp) protein (375aa)
Putative glycosyltransferase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZQ8_CALAS
putative glycosyltransferase Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
putative glycosyltransferase
Displaying items 1-30 of 31 in total

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