ggKbase home page

13_1_40cm_3_scaffold_443

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_443_1
CSP1_5_NC10, NC10, Bacteria

Not on your lists

3..1403
DNA (1401bp) protein (467aa)
hypothetical protein id=14430766 bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_3_scaffold_443_2
unknown

Not on your lists

1421..2008
DNA (588bp) protein (196aa)

This feature has no annotations

13_1_40cm_3_scaffold_443_3
unknown

Not on your lists

comp(2093..2230)
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_40cm_3_scaffold_443_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2290..5373
DNA (3084bp) protein (1028aa)
surface antigen (D15) Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase S9B dipeptidylpeptidase IV domain-containing protein id=24408262 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
peptidase S9B dipeptidylpeptidase IV domain-containing protein
13_1_40cm_3_scaffold_443_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5376..6362
DNA (987bp) protein (329aa)
Aldo/keto reductase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRB3_ALIAD
Predicted oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:CDM64158.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyri
aldo/keto reductase
13_1_40cm_3_scaffold_443_6
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6352..6846)
DNA (495bp) protein (165aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Methylomonas sp. MK1 RepID=UPI00035C7F8B
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:KFA93851.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystob
3-demethylubiquinone-9 3-methyltransferase
13_1_40cm_3_scaffold_443_7
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6865..7350)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3A7J4_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL27064.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. A
gstF; glutathione s-transferase protein
13_1_40cm_3_scaffold_443_8
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(7347..7745)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002DFD079
transcription regulator ArsR
ArsR family transcriptional regulatory protein {ECO:0000313|EMBL:BAC89378.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceu
13_1_40cm_3_scaffold_443_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7802..8542
DNA (741bp) protein (247aa)
exodeoxyribonuclease III Xth (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Exodeoxyribonuclease III Xth n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHX1_ANADF
exodeoxyribonuclease III Xth
13_1_40cm_3_scaffold_443_10
unknown

Not on your lists

8578..9249
DNA (672bp) protein (224aa)

This feature has no annotations

13_1_40cm_3_scaffold_443_11
Fistulina hepatica, Fistulina, Agaricales, Agaricomycetidae, Basidiomycota, Fungi

Not on your lists

comp(9250..9687)
DNA (438bp) protein (146aa)
Stress response protein NST1 {ECO:0000256|RuleBase:RU049441}; TaxID=1128425 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Fistulinac
13_1_40cm_3_scaffold_443_12
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9838..10446
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAH3_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS25719.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_3_scaffold_443_13
Mycobacterium parascrofulaceum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10535..11029
DNA (495bp) protein (165aa)
YceI-like domain protein n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P412_9MYCO
YceI-like domain protein {ECO:0000313|EMBL:EFG79201.1}; TaxID=525368 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium parascrofulaceum ATC
YceI family protein
13_1_40cm_3_scaffold_443_14
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(11004..12035)
DNA (1032bp) protein (344aa)
methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] id=14425027 bin=bin1_lowGC species=Methylomonas sp. MK1 genus=Methylomonas taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
methionine synthase
13_1_40cm_3_scaffold_443_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12178..13152
DNA (975bp) protein (325aa)
PREDICTED: ribonuclease UK114-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1964C
transposase for insertion sequence Tax=RBG_16_Gemmatimonadetes_66_8_curated
endoribonuclease L-PSP
13_1_40cm_3_scaffold_443_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13149..15842)
DNA (2694bp) protein (898aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NYB1_GRAMM rbh
Phosphoesterase {ECO:0000313|EMBL:AHG93810.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
phosphoesterase
13_1_40cm_3_scaffold_443_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15939..16934
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9E2_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93646.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 17 items

View Taxonomy