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13_1_40cm_3_scaffold_500

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_500_1
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

100..612
DNA (513bp) protein (171aa)
hypothetical protein
Uncharacterized protein Tax=GWA2_Ignavibacteria_54_16_curated
Uncharacterized protein id=4169652 bin=GWA2_Ignavibacteria_55_11 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
13_1_40cm_3_scaffold_500_2
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(619..996)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZXQ3_DESOH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW67011.1}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus
13_1_40cm_3_scaffold_500_3
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1080..1778)
DNA (699bp) protein (233aa)
FAD-binding molybdopterin dehydrogenase protein Tax=RBG_16_RIF_CHLX_72_14_curated
molybdopterin dehydrogenase FAD-binding protein
FAD-binding molybdopterin dehydrogenase protein id=14629627 bin=bin8_Chloro species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin8_Chloro organism_group=Chloroflexi
13_1_40cm_3_scaffold_500_4
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1874..2320)
DNA (447bp) protein (149aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZD58_TERRK
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein {ECO:0000313|EMBL:AFL87176.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terr
13_1_40cm_3_scaffold_500_5
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(2305..4449)
DNA (2145bp) protein (715aa)
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase protein id=14629629 bin=bin8_Chloro species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin8_Chloro organism_group=Chloroflexi
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase protein Tax=CSP1_4_Chloroflexi
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
13_1_40cm_3_scaffold_500_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

4780..6333
DNA (1554bp) protein (518aa)
malate synthase (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
malate synthase (EC:2.3.3.9)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000382ADD8
13_1_40cm_3_scaffold_500_7
Bacillus methanolicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6317..7633
DNA (1317bp) protein (439aa)
aceA; Isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase {ECO:0000313|EMBL:AIE58821.1}; EC=4.1.3.1 {ECO:0000313|EMBL:AIE58821.1};; TaxID=796606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus me
Isocitrate lyase n=1 Tax=Bacillus methanolicus MGA3 RepID=I3E3N5_BACMT
13_1_40cm_3_scaffold_500_8
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

7664..7969
DNA (306bp) protein (102aa)
mmsA; methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27); K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] Tax=RBG_16_Ac
Methylmalonate-semialdehyde dehydrogenase (Acylating) n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRG5_KORVE
methylmalonate-semialdehyde dehydrogenase
13_1_40cm_3_scaffold_500_9
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

7966..9057
DNA (1092bp) protein (364aa)
mmsA; methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27); K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] Tax=RBG_16_Ac
mmsA; methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
methylmalonate-semialdehyde dehydrogenase id=24563983 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_1_40cm_3_scaffold_500_10
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9057..9581
DNA (525bp) protein (175aa)
B-alanine synthase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q097R1_STIAD
beta-alanine synthase
B-alanine synthase {ECO:0000313|EMBL:EAU67921.1}; Beta-alanine synthase {ECO:0000313|EMBL:ADO75798.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterine
13_1_40cm_3_scaffold_500_11
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

9578..9883
DNA (306bp) protein (102aa)
hypothetical protein; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53] Tax=RBG_16_Acidobacteria_68_9_curated
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKD3_SORC5
hypothetical protein
13_1_40cm_3_scaffold_500_12
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

9884..10366
DNA (483bp) protein (161aa)
hypothetical protein Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein id=14633044 bin=bin9_gal15 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_3_scaffold_500_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10354..11739
DNA (1386bp) protein (462aa)
Dihydropyrimidinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKX9_9BACT
Dihydropyrimidinase {ECO:0000313|EMBL:EEF59473.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedospha
dihydropyrimidinase
13_1_40cm_3_scaffold_500_14
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

11746..13032
DNA (1287bp) protein (429aa)
putative aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=RBG_16_Zixibacteria_53_22_curated
Aminotransferase n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FRM2_STIAD id=5225712 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
alanine--glyoxylate transaminase
13_1_40cm_3_scaffold_500_15
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

13029..14513
DNA (1485bp) protein (495aa)
nitrate reductase id=24509602 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
nitrate reductase Tax=RBG_16_RIF_WS3X_71_46_curated
nitrate reductase
13_1_40cm_3_scaffold_500_16
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14482..15738
DNA (1257bp) protein (419aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14] Tax=RBG_16_Deltaproteobacteria_71_12_curated
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=6 Tax=Geobacillus RepID=C9S154_GEOSY
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_3_scaffold_500_17
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15731..17041
DNA (1311bp) protein (437aa)
dihydropyrimidine dehydrogenase (EC:1.3.1.1 1.3.1.2)
Dihydropyrimidine dehydrogenase [NADP+] n=1 Tax=uncultured bacterium A1Q1_fos_18 RepID=L7VVQ1_9BACT
yeiA; dihydroorotate dehydrogenase family protein Tax=RBG_16_Deltaproteobacteria_71_12_curated
13_1_40cm_3_scaffold_500_18
unknown

Not on your lists

17170..17706
DNA (537bp) protein (179aa)

This feature has no annotations

13_1_40cm_3_scaffold_500_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(17778..20939)
DNA (3162bp) protein (1054aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
TPR repeat-containing protein id=4790530 bin=GWC2_Methylomirabilis_70_16 species=Crocosphaera watsonii genus=Crocosphaera taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_3_scaffold_500_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21078..22925)
DNA (1848bp) protein (616aa)
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter transmembrane region
13_1_40cm_3_scaffold_500_21
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22936..23574)
DNA (639bp) protein (213aa)
hypothetical protein Tax=RBG_16_Gamma2_60_9_curated
hypothetical protein id=24594421 bin=RBG_19FT_COMBO_GAL15_69_19 species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_3_scaffold_500_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

23640..23909
DNA (270bp) protein (90aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_3_scaffold_500_23
unknown

Not on your lists

23924..24382
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_3_scaffold_500_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

24386..25564
DNA (1179bp) protein (393aa)
Twitching motility protein PilT n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P023_9DELT
pilus retraction protein PilT; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
twitching motility protein
13_1_40cm_3_scaffold_500_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

25513..25929
DNA (417bp) protein (139aa)
pilus retraction protein PilT; K02669 twitching motility protein PilT Tax=GWC2_Gemmatimonadetes_71_10_curated
twitching motility protein
pilus retraction protein PilT; K02669 twitching motility protein PilT id=7200260 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
13_1_40cm_3_scaffold_500_trna_1
unknown

Not on your lists

comp(25930..26001)
DNA (72bp)
transferRNA
13_1_40cm_3_scaffold_500_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26496..26843)
DNA (348bp) protein (116aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative uncharacterized protein id=3543940 bin=GWA1_ZB2_49_26 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
13_1_40cm_3_scaffold_500_27
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27402..28706
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QSW6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX64394.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
13_1_40cm_3_scaffold_500_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

28786..29253
DNA (468bp) protein (156aa)
chromate resistance protein n=1 Tax=Pseudomonas RepID=UPI000364FB7D
Chromate resistance exported protein
Chromate resistance exported protein {ECO:0000313|EMBL:AHG88912.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_500_29
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29443..30177
DNA (735bp) protein (245aa)
UPI0003CE25E7 related cluster n=1 Tax=unknown RepID=UPI0003CE25E7
ChrB protein {ECO:0000313|EMBL:ESX77908.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00
ChrB protein
Displaying items 1-30 of 33 in total

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