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13_1_40cm_3_scaffold_5762

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5762_1
unknown

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comp(1..63)
DNA (63bp) protein (21aa)

This feature has no annotations

13_1_40cm_3_scaffold_5762_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(44..2029)
DNA (1986bp) protein (662aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Multi-sensor hybrid histidine kinase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXH1_HERA2
multi-sensor hybrid histidine kinase
13_1_40cm_3_scaffold_5762_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2423..3112)
DNA (690bp) protein (230aa)
Predicted glutamine amidotransferases Tax=GWA2_Rokubacteria_73_35_curated
Peptidase C26 id=2304934 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase C26
13_1_40cm_3_scaffold_5762_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3109..3606)
DNA (498bp) protein (166aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_5762_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3624..5828)
DNA (2205bp) protein (735aa)
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHM8_RHOM4
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACY47986.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s
13_1_40cm_3_scaffold_5762_6
unknown

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comp(5813..6337)
DNA (525bp) protein (175aa)

This feature has no annotations

13_1_40cm_3_scaffold_5762_7
unknown

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6473..6580
DNA (108bp) protein (36aa)

This feature has no annotations

13_1_40cm_3_scaffold_5762_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6656..7162
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D6_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_5762_9
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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7166..8167
DNA (1002bp) protein (334aa)
Putative uncharacterized protein id=3650202 bin=GWA2_Ignavibacteriae_54_16_partial species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria rbh
hypothetical protein Tax=GWA2_Ignavibacteria_54_16_curated
hypothetical protein
13_1_40cm_3_scaffold_5762_10

Not on your lists

8180..8500
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWF6_RUBXD
Marine sediment metagenome DNA, contig: S01H1_S22089 {ECO:0000313|EMBL:GAG19797.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_40cm_3_scaffold_5762_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8544..9887
DNA (1344bp) protein (448aa)
Proton/peptide symporter family protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D947_MYXXD
proton/peptide symporter family protein; K03305 proton-dependent oligopeptide transporter, POT family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
proton/peptide symporter family protein
13_1_40cm_3_scaffold_5762_12
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9957..10952)
DNA (996bp) protein (332aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q301_9FIRM
oligopeptide transport ATP-binding protein AppF-like Tax=RBG_16_Betaproteobacteria_66_20_curated
oligopeptide/dipeptide ABC transporter, ATPase subunit
13_1_40cm_3_scaffold_5762_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10949..11944)
DNA (996bp) protein (332aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=2 Tax=Halanaerobium RepID=E3DNP1_HALPG id=5224083 bin=16ft_combo_ws3_JS1 species=unknown genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
oligopeptide/dipeptide ABC transporter, ATPase subunit
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AHG90217.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_5762_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11956..12888)
DNA (933bp) protein (311aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NE48_DESAR
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ABC-type transporter, integral membrane subunit
13_1_40cm_3_scaffold_5762_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12885..13898)
DNA (1014bp) protein (338aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S5I0_PROA2
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
binding-protein-dependent transport system inner membrane protein
13_1_40cm_3_scaffold_5762_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13899..14264)
DNA (366bp) protein (122aa)
Oligopeptide-binding protein AppA n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YL55_THEYD
putative peptide ABC transporter substrate binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ABC-type transporter, periplasmic subunit
Displaying 16 items

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