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13_1_40cm_3_scaffold_7600

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_7600_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(142..687)
DNA (546bp) protein (182aa)
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Peptide deformylase id=4811764 bin=GWC2_Ignavibacteria_56_12 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
formylmethionine deformylase
13_1_40cm_3_scaffold_7600_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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747..1358
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWF6_9BACT
uncharacterized MobA-like protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
4-diphosphocytidyl-2C-methyl-D-erythritol synthase
13_1_40cm_3_scaffold_7600_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1467..2900
DNA (1434bp) protein (478aa)
Iron-regulated ABC transporter membrane component SufB n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETI0_9BACT
Fe-S cluster assembly protein SufB Tax=RBG_16_Gemmatimonadetes_66_8_curated
Iron-regulated ABC transporter membrane component SufB
13_1_40cm_3_scaffold_7600_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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2897..3592
DNA (696bp) protein (232aa)
Fe-S cluster assembly ATP-binding protein n=2 Tax=Xanthomonas RepID=V7ZBF3_9XANT
Iron-regulated ABC transporter ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
FeS assembly ATPase SufC
13_1_40cm_3_scaffold_7600_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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3614..4918
DNA (1305bp) protein (435aa)
Iron-regulated ABC transporter permease protein SufD Tax=GWC2_Gemmatimonadetes_71_10_curated
SufD, needed for fhuF Fe-S center production/stability id=2101211 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
FeS assembly protein SufD
13_1_40cm_3_scaffold_7600_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4915..5361
DNA (447bp) protein (149aa)
Modular FeS cluster scaffolding protein NifU Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein id=14431319 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
sufU; iron sulfur cluster assembly protein SufU
13_1_40cm_3_scaffold_7600_7
Paenibacillus sp. MAEPY2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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5361..6587
DNA (1227bp) protein (409aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1395587 species="Bacteria; Firmic
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00037CFF17
cysteine desulfurase
13_1_40cm_3_scaffold_7600_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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6619..7593
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BDA7F rbh
putative ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ABC transporter related protein
13_1_40cm_3_scaffold_7600_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7586..8842
DNA (1257bp) protein (419aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC69_GEMAT
hypothetical membrane protein; K01992 ABC-2 type transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical membrane protein
13_1_40cm_3_scaffold_7600_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9343..10227
DNA (885bp) protein (295aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J5_GEMAT
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG
Displaying 10 items

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