ggKbase home page

13_1_40cm_3_scaffold_8844

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_8844_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3..506
DNA (504bp) protein (168aa)
sensor histidine kinase/response regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
Histidine kinase id=2285108 bin=GWA2_Methylomirabilis_73_35 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_3_scaffold_8844_2
Leptospira inadai, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(428..817)
DNA (390bp) protein (130aa)
Methylated-DNA--[protein]-cysteine S-methyltransferase, TIGR00589 family n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0GEN3_9LEPT
Methylated-DNA--[protein]-cysteine S-methyltransferase, TIGR00589 family {ECO:0000313|EMBL:EQA35617.1}; TaxID=1049790 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" sour
Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding protein
13_1_40cm_3_scaffold_8844_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(833..1285)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB51_GEMAT
NUDIX family hydrolase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
NUDIX hydrolase
13_1_40cm_3_scaffold_8844_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1297..3543)
DNA (2247bp) protein (749aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Type II secretion system protein E (GspE) id=2300076 bin=GWA2_Elusimicrobia_66_18 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum rbh
general secretory pathway protein E
13_1_40cm_3_scaffold_8844_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3593..5230)
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A514_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_8844_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5241..5573)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A514_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_8844_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5592..7118
DNA (1527bp) protein (509aa)
trpE; anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Anthranilate synthase component I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB52_GEMAT
anthranilate synthase component I
13_1_40cm_3_scaffold_8844_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7129..8709
DNA (1581bp) protein (527aa)
cya; adenylate cyclase (EC:4.6.1.1); K01768 adenylate cyclase [EC:4.6.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
cya; adenylate cyclase (EC:4.6.1.1)
Adenylate cyclase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB53_GEMAT
13_1_40cm_3_scaffold_8844_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8691..9362)
DNA (672bp) protein (224aa)
Maf-like protein GAU_2420 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB56_GEMAT
maf; septum formation protein Maf; K06287 septum formation protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
maf; septum formation protein Maf
13_1_40cm_3_scaffold_8844_10
unknown

Not on your lists

comp(9302..10012)
DNA (711bp) protein (237aa)

This feature has no annotations

13_1_40cm_3_scaffold_8844_11
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(10091..10537)
DNA (447bp) protein (149aa)
D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-] Tax=RBG_16_Acidobacteria_68_9_curated
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B307E2
hypothetical protein
13_1_40cm_3_scaffold_8844_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10534..11583)
DNA (1050bp) protein (350aa)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_7
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB63_GEMAT
Displaying 12 items

View Taxonomy