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13_1_40cm_3_scaffold_949

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_949_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..1320)
DNA (1320bp) protein (440aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R1_GEMAT
multidrug resistance protein
Multidrug resistance protein {ECO:0000313|EMBL:BAH37571.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (stra
13_1_40cm_3_scaffold_949_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1327..2373)
DNA (1047bp) protein (349aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R2_GEMAT
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:AHG89973.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_949_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2396..3397)
DNA (1002bp) protein (334aa)
Outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R3_GEMAT
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AHG89974.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_949_4
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3692..4363)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E19934
TetR family transcriptional regulator {ECO:0000313|EMBL:KIF81779.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="He
Transcriptional regulator
13_1_40cm_3_scaffold_949_5

Not on your lists

comp(4423..4911)
DNA (489bp) protein (163aa)
DinB family protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFF0_9BACT
DinB family protein {ECO:0000313|EMBL:EQB63164.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
hypothetical protein
13_1_40cm_3_scaffold_949_6
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(4908..5342)
DNA (435bp) protein (145aa)
Lactoylglutathione lyase-like lyase n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QQP4_NOSS7
lactoylglutathione lyase-like lyase
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:AFY47481.1}; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
13_1_40cm_3_scaffold_949_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5705..6697)
DNA (993bp) protein (331aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABC1_GEMAT
Nucleotidyl transferase
13_1_40cm_3_scaffold_949_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6694..7047)
DNA (354bp) protein (118aa)
Cupin domain-containing protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UH35_MYXSD
cupin domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cupin domain-containing protein
13_1_40cm_3_scaffold_949_9
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

comp(7044..7631)
DNA (588bp) protein (196aa)
napG; ferredoxin-type protein NapG (EC:1.7.99.4); K02573 ferredoxin-type protein NapG Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
Putative ferredoxin n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67S42_SYMTH
ferredoxin
13_1_40cm_3_scaffold_949_10
CG_Deferri_01, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(7628..9637)
DNA (2010bp) protein (670aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI0003822517
hypothetical protein Tax=CG_Deferri_01
peptidase m1 membrane alanine aminopeptidase
13_1_40cm_3_scaffold_949_11
unknown

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10630..11277
DNA (648bp) protein (216aa)

This feature has no annotations

13_1_40cm_3_scaffold_949_12
unknown

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11234..11812
DNA (579bp) protein (193aa)

This feature has no annotations

13_1_40cm_3_scaffold_949_13
unknown

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11824..12414
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_40cm_3_scaffold_949_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12397..13404)
DNA (1008bp) protein (336aa)
Streptogramin lyase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKG0_RHOM4
streptogramin lyase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
streptogramin lyase
13_1_40cm_3_scaffold_949_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13407..13628)
DNA (222bp) protein (74aa)
atpH; ATP synthase subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
atpH; ATP synthase subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ATPD_GEMAT
13_1_40cm_3_scaffold_949_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13613..13882)
DNA (270bp) protein (90aa)
atpH; ATP synthase subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP synthase subunit delta
13_1_40cm_3_scaffold_949_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13879..14433)
DNA (555bp) protein (185aa)
atpF; ATP synthase subunit b (EC:3.6.3.14); K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ATP synthase subunit b n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABC4_GEMAT
ATP synthase subunit b
13_1_40cm_3_scaffold_949_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14435..14707)
DNA (273bp) protein (91aa)
ATP synthase F0 subcomplex C subunit (EC:3.6.3.14) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ATP synthase subunit c id=4010161 bin=GWF2_Bacteroidetes_42_66 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
13_1_40cm_3_scaffold_949_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14728..15579)
DNA (852bp) protein (284aa)
ATP synthase subunit a n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABC6_GEMAT
ATP synthase subunit a
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
13_1_40cm_3_scaffold_949_20
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(15576..15905)
DNA (330bp) protein (110aa)
Tax=RBG_16_Acidobacteria_68_9_curated
13_1_40cm_3_scaffold_949_21
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(15940..16185)
DNA (246bp) protein (82aa)
Tax=RBG_16_Acidobacteria_68_9_curated
13_1_40cm_3_scaffold_949_22
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

16271..17308
DNA (1038bp) protein (346aa)
hypothetical protein; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=RBG_16_Acidobacteria_68_9_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD0_GEMAT
ATPase associated with various cellular activities AAA_3
13_1_40cm_3_scaffold_949_23
unknown

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comp(17387..17785)
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_40cm_3_scaffold_949_24
RLO_PLX_64_10, Bacteria

Not on your lists

comp(17745..18734)
DNA (990bp) protein (330aa)
Alpha/beta hydrolase fold protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B5U1_STRRD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
alpha/beta hydrolase fold protein
13_1_40cm_3_scaffold_949_25
unknown

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comp(18731..19072)
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_3_scaffold_949_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19127..19555
DNA (429bp) protein (143aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91205.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_949_27
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

19679..23005
DNA (3327bp) protein (1109aa)
Transcriptional regulator, putative ATPase, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQA9_PSEUX
transcriptional activator domain-containing protein Tax=RBG_16_Acidobacteria_68_9_curated
winged helix family transcriptional regulator
13_1_40cm_3_scaffold_949_28
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(23014..24387)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD2_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_3_scaffold_949_29
uncultured myxobacterium HF0200_05J13, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(24675..25274)
DNA (600bp) protein (200aa)
FOG: CheY-like receiver n=1 Tax=uncultured myxobacterium HF0200_05J13 RepID=E7C3L8_9DELT
FOG: CheY-like receiver {ECO:0000313|EMBL:ADI22042.1}; TaxID=723557 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; environmental samples.;" source="uncultured myxobacterium HF02
DNA-binding response regulator
13_1_40cm_3_scaffold_949_30
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(25399..26130)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYM4_THEOJ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
Displaying items 1-30 of 31 in total

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