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13_1_40cm_3_scaffold_3174_3

Organism: 13_1_40CM_3_Gemmatimonadetes_65_8

partial RP 14 / 55 BSCG 11 / 51 ASCG 5 / 38
Location: comp(1411..2376)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A692_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 293.0
  • Bit_score: 469
  • Evalue 2.40e-129
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 292.0
  • Bit_score: 483
  • Evalue 2.20e-133
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 293.0
  • Bit_score: 469
  • Evalue 6.70e-130

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 966
ATGCCGCGTACCCGGAAGAAAACGAAGACTGCACCCGCCGCGAAGGCCAAGGCGAAGGCGCCCGTCGCTACCGAGCGACGGGTCGTCAAGCGTCGCGGCCGGCGCCGTGGTCTGCTCTCCGGTCTCGGCTCTCACGAGCACGAGCGCGACATCCTCGACCAGTACCTGCACGAAGTGTCGAAGACTCCGCTGCTCACGCAGAAGGAGGAGATCGCCCTCGCCCGGAAGGTGCGGGCCGGCGATCAGGAGGCCATGCAGGAGCTGGTGAAGCGCAATCTGCGGTTCGTGATCTCGGTGGCGAAGAAGTATCAGAACCGCGGGCTGCCGCTCACCGATCTGATCGGTGAGGGCAACGTCGGCCTGCTCACGGCCGCGCGGAAGTTCGATCCCGATCAGGGCGTCAAGTTCATTTCCTACGCCGTGTGGTGGATCCGGCAGGCGATTCTCGCCGCGCTGGCCCGGCAGGGACGGACGGTTCGCGTGCCGCTCAACCGGACCGCGGATCTGTCGCGCATCGTGCGCACGGCGGAGTATCTGCGGCAGACGCTCCGTCGCGAGCCGACGCCCGAAGAGATCGCCGACGCGACGAAGCTGTCGCTCGAGGTGGTGCAGTCGCTCGCCGCGCTCAATACCGGCGACGTGCGGCTCGATGCTCCGCTCGACCCCGACGGTGACCGCTCGCTCATCGAGCGCTTCATCGCCGAGGATCTGCCGGACACGGAAGATCAGGCGATGGACCGCTTCCTGTCCGACGAGATCGAGCAGGCGCTCAACACGCTGCAGCGTCGCGACGCGAAGGTGCTGCGCCTCTACTTCGGTCTCGACGGTGGACGCGAGCACACGCTCGAAGAGATCGGCGGGATGCTCGGCGTCACGCGTGAGCGCGTTCGCCAGCTGCGCGATCGCGCACTCAAGCGACTGCGCGATGGCGACGTCGGCAAGGCTCTAGCGAGCTTCGCCGCCTGA
PROTEIN sequence
Length: 322
MPRTRKKTKTAPAAKAKAKAPVATERRVVKRRGRRRGLLSGLGSHEHERDILDQYLHEVSKTPLLTQKEEIALARKVRAGDQEAMQELVKRNLRFVISVAKKYQNRGLPLTDLIGEGNVGLLTAARKFDPDQGVKFISYAVWWIRQAILAALARQGRTVRVPLNRTADLSRIVRTAEYLRQTLRREPTPEEIADATKLSLEVVQSLAALNTGDVRLDAPLDPDGDRSLIERFIAEDLPDTEDQAMDRFLSDEIEQALNTLQRRDAKVLRLYFGLDGGREHTLEEIGGMLGVTRERVRQLRDRALKRLRDGDVGKALASFAA*